30 items (Trichoplax adhaerens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3S2B0_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (657 aa)
	B3S2B4_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (649 aa)
	B3S3Y5_TRIAD	Uncharacterized protein. (298 aa)
	B3S2B5_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (603 aa)
	B3SEA2_TRIAD	Acyl-CoA_dh_M domain-containing protein. (192 aa)
	B3S4G3_TRIAD	Uncharacterized protein. (590 aa)
	B3S4G4_TRIAD	Nudix hydrolase domain-containing protein. (391 aa)
	B3S4X7_TRIAD	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (534 aa)
	B3S9Y8_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (660 aa)
	B3SE36_TRIAD	ACOX domain-containing protein. (508 aa)
	B3SEA1_TRIAD	Uncharacterized protein. (248 aa)
	B3RJ25_TRIAD	Uncharacterized protein. (723 aa)
	B3RJW6_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (698 aa)
	B3RKI2_TRIAD	Uncharacterized protein; Belongs to the TPP enzyme family. (655 aa)
	B3RMX8_TRIAD	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	B3RMX9_TRIAD	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	B3RPN3_TRIAD	Uncharacterized protein. (269 aa)
	B3RQJ3_TRIAD	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (689 aa)
	B3RQP6_TRIAD	Uncharacterized protein. (431 aa)
	B3RSX4_TRIAD	Uncharacterized protein. (388 aa)
	B3SEJ2_TRIAD	ACOX domain-containing protein. (281 aa)
	B3RT97_TRIAD	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (433 aa)
	B3RVE3_TRIAD	Uncharacterized protein. (297 aa)
	B3RVE4_TRIAD	Uncharacterized protein. (301 aa)
	B3RVE5_TRIAD	Uncharacterized protein. (307 aa)
	B3RVE6_TRIAD	Uncharacterized protein. (301 aa)
	B3RYN4_TRIAD	Uncharacterized protein. (363 aa)
	B3RYV9_TRIAD	Uncharacterized protein. (500 aa)
	B3S2A7_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (658 aa)
	B3S2A9_TRIAD	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (657 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RJ25_TRIAD	B3RJW6_TRIAD	B3RJ25	B3RJW6	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.724
B3RJ25_TRIAD	B3RKI2_TRIAD	B3RJ25	B3RKI2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TPP enzyme family.	0.534
B3RJ25_TRIAD	B3RQJ3_TRIAD	B3RJ25	B3RQJ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.717
B3RJ25_TRIAD	B3RQP6_TRIAD	B3RJ25	B3RQP6	Uncharacterized protein.	Uncharacterized protein.	0.483
B3RJ25_TRIAD	B3RSX4_TRIAD	B3RJ25	B3RSX4	Uncharacterized protein.	Uncharacterized protein.	0.577
B3RJ25_TRIAD	B3RT97_TRIAD	B3RJ25	B3RT97	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.680
B3RJ25_TRIAD	B3RYV9_TRIAD	B3RJ25	B3RYV9	Uncharacterized protein.	Uncharacterized protein.	0.619
B3RJ25_TRIAD	B3S2A7_TRIAD	B3RJ25	B3S2A7	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.449
B3RJ25_TRIAD	B3S2A9_TRIAD	B3RJ25	B3S2A9	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.449
B3RJ25_TRIAD	B3S2B0_TRIAD	B3RJ25	B3S2B0	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.449
B3RJ25_TRIAD	B3S2B4_TRIAD	B3RJ25	B3S2B4	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.449
B3RJ25_TRIAD	B3S2B5_TRIAD	B3RJ25	B3S2B5	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.438
B3RJ25_TRIAD	B3S9Y8_TRIAD	B3RJ25	B3S9Y8	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.438
B3RJ25_TRIAD	B3SE36_TRIAD	B3RJ25	B3SE36	Uncharacterized protein.	ACOX domain-containing protein.	0.449
B3RJ25_TRIAD	B3SEA2_TRIAD	B3RJ25	B3SEA2	Uncharacterized protein.	Acyl-CoA_dh_M domain-containing protein.	0.449
B3RJW6_TRIAD	B3RJ25_TRIAD	B3RJW6	B3RJ25	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.724
B3RJW6_TRIAD	B3RQJ3_TRIAD	B3RJW6	B3RQJ3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.955
B3RJW6_TRIAD	B3RQP6_TRIAD	B3RJW6	B3RQP6	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.421
B3RJW6_TRIAD	B3RSX4_TRIAD	B3RJW6	B3RSX4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.605
B3RJW6_TRIAD	B3RT97_TRIAD	B3RJW6	B3RT97	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.976