(108 nodes) Leucine-rich repeats, outliers network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3RI20_TRIAD	Uncharacterized protein. (495 aa)
	B3SET2_TRIAD	Uncharacterized protein. (145 aa)
	B3SEE8_TRIAD	Uncharacterized protein. (320 aa)
	B3SDZ2_TRIAD	Uncharacterized protein. (205 aa)
	B3SDG0_TRIAD	Uncharacterized protein. (271 aa)
	B3SD40_TRIAD	Uncharacterized protein. (282 aa)
	B3SD38_TRIAD	Uncharacterized protein. (185 aa)
	B3SD37_TRIAD	Uncharacterized protein. (272 aa)
	B3SD36_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (726 aa)
	B3SD34_TRIAD	Uncharacterized protein. (318 aa)
	B3SD33_TRIAD	Uncharacterized protein. (127 aa)
	B3SD10_TRIAD	Uncharacterized protein. (239 aa)
	B3SD07_TRIAD	Uncharacterized protein. (330 aa)
	B3SCM4_TRIAD	Uncharacterized protein. (236 aa)
	B3SCM1_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein. (370 aa)
	B3SCM0_TRIAD	Uncharacterized protein. (686 aa)
	B3SCG9_TRIAD	Uncharacterized protein. (127 aa)
	B3SC28_TRIAD	Uncharacterized protein. (1068 aa)
	B3SBS8_TRIAD	Uncharacterized protein. (449 aa)
	B3SBS7_TRIAD	Uncharacterized protein. (226 aa)
	B3SBR6_TRIAD	Uncharacterized protein. (127 aa)
	B3SB93_TRIAD	Uncharacterized protein. (229 aa)
	B3SB92_TRIAD	Uncharacterized protein. (351 aa)
	B3SB90_TRIAD	Uncharacterized protein. (474 aa)
	B3SAM3_TRIAD	Uncharacterized protein. (517 aa)
	B3SAC6_TRIAD	Uncharacterized protein. (309 aa)
	B3S961_TRIAD	Predicted protein; Belongs to the G-protein coupled receptor 2 family. (1171 aa)
	B3S8T1_TRIAD	F-box domain-containing protein. (474 aa)
	B3S8P6_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (455 aa)
	B3S8K9_TRIAD	Uncharacterized protein. (740 aa)
	B3S8E5_TRIAD	Uncharacterized protein. (1244 aa)
	B3S8D0_TRIAD	Uncharacterized protein. (173 aa)
	B3S8C9_TRIAD	Uncharacterized protein. (138 aa)
	B3S841_TRIAD	Uncharacterized protein. (429 aa)
	B3S7C4_TRIAD	Uncharacterized protein. (230 aa)
	B3S7C3_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (599 aa)
	B3S7C1_TRIAD	Uncharacterized protein. (592 aa)
	B3S7C0_TRIAD	Uncharacterized protein. (188 aa)
	B3S7B9_TRIAD	Uncharacterized protein. (226 aa)
	B3S6G5_TRIAD	Uncharacterized protein. (671 aa)
	B3S6B8_TRIAD	Uncharacterized protein. (172 aa)
	B3S687_TRIAD	Uncharacterized protein. (839 aa)
	B3S637_TRIAD	Endo/exonuclease/phosphatase domain-containing protein. (538 aa)
	B3S477_TRIAD	Uncharacterized protein. (426 aa)
	B3S3J9_TRIAD	Uncharacterized protein. (1396 aa)
	B3S3F9_TRIAD	Uncharacterized protein. (534 aa)
	B3S324_TRIAD	Uncharacterized protein. (416 aa)
	B3S268_TRIAD	Uncharacterized protein. (2814 aa)
	B3S208_TRIAD	Uncharacterized protein. (1332 aa)
	B3S1E5_TRIAD	Uncharacterized protein. (608 aa)
	B3S1B9_TRIAD	Uncharacterized protein. (1784 aa)
	B3S0N0_TRIAD	Uncharacterized protein. (264 aa)
	B3S086_TRIAD	Uncharacterized protein. (403 aa)
	B3S062_TRIAD	Uncharacterized protein. (331 aa)
	B3S044_TRIAD	Uncharacterized protein. (279 aa)
	B3RYZ4_TRIAD	F-box domain-containing protein. (313 aa)
	B3RYP5_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (934 aa)
	B3RYL4_TRIAD	Uncharacterized protein. (445 aa)
	B3RYA3_TRIAD	Dynein assembly factor 1, axonemal homolog. (1081 aa)
	B3RY52_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (543 aa)
	B3RY51_TRIAD	Uncharacterized protein. (128 aa)
	B3RY26_TRIAD	RanGAP1_C domain-containing protein. (497 aa)
	B3RXA2_TRIAD	Uncharacterized protein. (340 aa)
	B3RXA1_TRIAD	Uncharacterized protein. (187 aa)
	B3RXA0_TRIAD	Uncharacterized protein. (306 aa)
	B3RX99_TRIAD	Uncharacterized protein. (209 aa)
	B3RWM9_TRIAD	Uncharacterized protein. (661 aa)
	B3RW64_TRIAD	Uncharacterized protein. (280 aa)
	B3RVB7_TRIAD	Predicted protein. (345 aa)
	B3RUH4_TRIAD	Uncharacterized protein. (342 aa)
	B3RSJ4_TRIAD	Uncharacterized protein. (692 aa)
	B3RSF5_TRIAD	Uncharacterized protein. (288 aa)
	B3RS12_TRIAD	Uncharacterized protein. (148 aa)
	B3RRY9_TRIAD	B3_4 domain-containing protein. (526 aa)
	B3RR90_TRIAD	Uncharacterized protein. (545 aa)
	B3RQ69_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein. (952 aa)
	B3RQ68_TRIAD	Uncharacterized protein. (276 aa)
	B3RQ66_TRIAD	Uncharacterized protein. (743 aa)
	B3RQ65_TRIAD	Uncharacterized protein. (740 aa)
	B3RPU9_TRIAD	Uncharacterized protein. (249 aa)
	B3RPL2_TRIAD	Uncharacterized protein. (230 aa)
	B3RP37_TRIAD	RING-type domain-containing protein. (648 aa)
	B3RMY1_TRIAD	Uncharacterized protein. (431 aa)
	B3RMK3_TRIAD	Uncharacterized protein. (650 aa)
	B3RMH8_TRIAD	Uncharacterized protein. (167 aa)
	B3RMC9_TRIAD	Uncharacterized protein. (256 aa)
	B3RMC8_TRIAD	Uncharacterized protein. (334 aa)
	B3RM75_TRIAD	Uncharacterized protein. (584 aa)
	B3RM09_TRIAD	Uncharacterized protein. (416 aa)
	B3RM08_TRIAD	Uncharacterized protein. (759 aa)
	B3RKY1_TRIAD	Uncharacterized protein. (245 aa)
	B3RKX4_TRIAD	Uncharacterized protein. (235 aa)
	B3RKX3_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (643 aa)
	B3RKX1_TRIAD	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (749 aa)
	B3RKS5_TRIAD	Uncharacterized protein. (574 aa)
	B3RKQ5_TRIAD	Uncharacterized protein. (424 aa)
	B3RKL9_TRIAD	Uncharacterized protein. (415 aa)
	B3RKL5_TRIAD	Uncharacterized protein. (611 aa)
	B3RKB8_TRIAD	Uncharacterized protein. (175 aa)
	B3RK98_TRIAD	Uncharacterized protein. (298 aa)
	B3RK06_TRIAD	Uncharacterized protein. (652 aa)
	B3RJL9_TRIAD	Uncharacterized protein. (950 aa)
	B3RIT5_TRIAD	Uncharacterized protein. (249 aa)
	B3RIC1_TRIAD	Uncharacterized protein. (796 aa)
	B3RIA7_TRIAD	Roc domain-containing protein. (1038 aa)
	B3RI44_TRIAD	Uncharacterized protein. (404 aa)
	B3RI43_TRIAD	Uncharacterized protein. (225 aa)
	B3RI37_TRIAD	Uncharacterized protein. (227 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RI20_TRIAD	B3RYA3_TRIAD	B3RI20	B3RYA3	Uncharacterized protein.	Dynein assembly factor 1, axonemal homolog.	0.413
B3RI37_TRIAD	B3S6B8_TRIAD	B3RI37	B3S6B8	Uncharacterized protein.	Uncharacterized protein.	0.424
B3RI37_TRIAD	B3SD40_TRIAD	B3RI37	B3SD40	Uncharacterized protein.	Uncharacterized protein.	0.481
B3RI37_TRIAD	B3SET2_TRIAD	B3RI37	B3SET2	Uncharacterized protein.	Uncharacterized protein.	0.437
B3RI44_TRIAD	B3RKX1_TRIAD	B3RI44	B3RKX1	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.411
B3RI44_TRIAD	B3SB92_TRIAD	B3RI44	B3SB92	Uncharacterized protein.	Uncharacterized protein.	0.407
B3RIT5_TRIAD	B3RMK3_TRIAD	B3RIT5	B3RMK3	Uncharacterized protein.	Uncharacterized protein.	0.472
B3RIT5_TRIAD	B3RQ65_TRIAD	B3RIT5	B3RQ65	Uncharacterized protein.	Uncharacterized protein.	0.461
B3RIT5_TRIAD	B3RQ66_TRIAD	B3RIT5	B3RQ66	Uncharacterized protein.	Uncharacterized protein.	0.432
B3RIT5_TRIAD	B3RR90_TRIAD	B3RIT5	B3RR90	Uncharacterized protein.	Uncharacterized protein.	0.458
B3RIT5_TRIAD	B3RYP5_TRIAD	B3RIT5	B3RYP5	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.412
B3RIT5_TRIAD	B3S7C1_TRIAD	B3RIT5	B3S7C1	Uncharacterized protein.	Uncharacterized protein.	0.504
B3RIT5_TRIAD	B3S8K9_TRIAD	B3RIT5	B3S8K9	Uncharacterized protein.	Uncharacterized protein.	0.447
B3RIT5_TRIAD	B3SB93_TRIAD	B3RIT5	B3SB93	Uncharacterized protein.	Uncharacterized protein.	0.419
B3RIT5_TRIAD	B3SBS8_TRIAD	B3RIT5	B3SBS8	Uncharacterized protein.	Uncharacterized protein.	0.512
B3RIT5_TRIAD	B3SCG9_TRIAD	B3RIT5	B3SCG9	Uncharacterized protein.	Uncharacterized protein.	0.519
B3RIT5_TRIAD	B3SCM0_TRIAD	B3RIT5	B3SCM0	Uncharacterized protein.	Uncharacterized protein.	0.476
B3RK98_TRIAD	B3RKL9_TRIAD	B3RK98	B3RKL9	Uncharacterized protein.	Uncharacterized protein.	0.523
B3RK98_TRIAD	B3RKX4_TRIAD	B3RK98	B3RKX4	Uncharacterized protein.	Uncharacterized protein.	0.440
B3RK98_TRIAD	B3RMC8_TRIAD	B3RK98	B3RMC8	Uncharacterized protein.	Uncharacterized protein.	0.440