(70 nodes) DEAD-like helicases superfamily network (Trichoplax adhaerens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B3SCV4_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (524 aa)
	B3SC12_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (369 aa)
	B3SBY3_TRIAD	Uncharacterized protein. (569 aa)
	B3SBW2_TRIAD	Uncharacterized protein. (2140 aa)
	B3SBV6_TRIAD	Uncharacterized protein. (679 aa)
	B3SAG4_TRIAD	DEAD box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (401 aa)
	B3SAG2_TRIAD	Uncharacterized protein. (1395 aa)
	B3S9N7_TRIAD	Uncharacterized protein. (1002 aa)
	B3RYW6_TRIAD	Uncharacterized protein. (642 aa)
	B3RYU5_TRIAD	Helicase ATP-binding domain-containing protein. (720 aa)
	B3RYJ4_TRIAD	Helicase ATP-binding domain-containing protein. (899 aa)
	B3RYH6_TRIAD	Uncharacterized protein. (807 aa)
	B3RYG2_TRIAD	Uncharacterized protein. (678 aa)
	B3RYG0_TRIAD	Uncharacterized protein. (2176 aa)
	B3RXL1_TRIAD	Uncharacterized protein. (388 aa)
	B3RX51_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (533 aa)
	B3RWS3_TRIAD	RNA helicase. (491 aa)
	B3RWI3_TRIAD	Uncharacterized protein. (1492 aa)
	B3RW01_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (651 aa)
	B3RVT3_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (463 aa)
	B3RLL9_TRIAD	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1018 aa)
	B3RKG6_TRIAD	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1418 aa)
	B3RJV2_TRIAD	Helicase ATP-binding domain-containing protein. (191 aa)
	B3RJU3_TRIAD	Uncharacterized protein. (512 aa)
	B3RJM9_TRIAD	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (605 aa)
	B3RJ62_TRIAD	Uncharacterized protein. (725 aa)
	B3RIS6_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (654 aa)
	B3RIM1_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (393 aa)
	B3RIJ4_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (418 aa)
	B3RVR9_TRIAD	Uncharacterized protein. (633 aa)
	B3RVC9_TRIAD	Uncharacterized protein. (506 aa)
	B3RVA8_TRIAD	Uncharacterized protein. (668 aa)
	B3RV31_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (420 aa)
	B3RUJ5_TRIAD	Uncharacterized protein. (954 aa)
	B3RUJ4_TRIAD	Uncharacterized protein. (849 aa)
	B3RU71_TRIAD	Uncharacterized protein. (881 aa)
	B3RTQ9_TRIAD	Uncharacterized protein. (1020 aa)
	B3RTG7_TRIAD	Uncharacterized protein. (704 aa)
	B3RSE5_TRIAD	Uncharacterized protein. (1562 aa)
	B3RRU3_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (435 aa)
	B3RRT9_TRIAD	Uncharacterized protein. (1256 aa)
	B3RR36_TRIAD	Uncharacterized protein. (981 aa)
	B3RR35_TRIAD	Uncharacterized protein. (897 aa)
	B3S2Q7_TRIAD	Helicase ATP-binding domain-containing protein. (702 aa)
	B3S348_TRIAD	Uncharacterized protein. (412 aa)
	B3S405_TRIAD	Uncharacterized protein. (1351 aa)
	B3S4A8_TRIAD	Uncharacterized protein. (849 aa)
	B3S577_TRIAD	Uncharacterized protein. (2314 aa)
	B3S6C0_TRIAD	Helicase ATP-binding domain-containing protein. (995 aa)
	B3S6H2_TRIAD	RNA helicase. (504 aa)
	B3S7D7_TRIAD	Uncharacterized protein. (701 aa)
	B3S7I1_TRIAD	Uncharacterized protein. (976 aa)
	B3S859_TRIAD	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (752 aa)
	B3RR31_TRIAD	Uncharacterized protein. (497 aa)
	B3RQJ1_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (722 aa)
	B3RQA4_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (424 aa)
	B3RPU4_TRIAD	Uncharacterized protein. (727 aa)
	B3RPR1_TRIAD	Uncharacterized protein. (1207 aa)
	B3RPP6_TRIAD	Uncharacterized protein. (619 aa)
	B3RPG2_TRIAD	Uncharacterized protein. (937 aa)
	B3RP53_TRIAD	Uncharacterized protein. (425 aa)
	B3RNC4_TRIAD	Uncharacterized protein. (931 aa)
	B3RLS3_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (625 aa)
	B3S2Q5_TRIAD	Uncharacterized protein. (685 aa)
	B3S281_TRIAD	Uncharacterized protein. (616 aa)
	B3S223_TRIAD	Uncharacterized protein; Belongs to the DEAD box helicase family. (541 aa)
	B3S1V8_TRIAD	Uncharacterized protein. (687 aa)
	B3S181_TRIAD	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (616 aa)
	B3S0B1_TRIAD	Uncharacterized protein. (871 aa)
	B3RZN1_TRIAD	Uncharacterized protein. (404 aa)

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RIJ4_TRIAD	B3RNC4_TRIAD	B3RIJ4	B3RNC4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.579
B3RIJ4_TRIAD	B3RPG2_TRIAD	B3RIJ4	B3RPG2	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.585
B3RIJ4_TRIAD	B3RRT9_TRIAD	B3RIJ4	B3RRT9	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.580
B3RIJ4_TRIAD	B3RSE5_TRIAD	B3RIJ4	B3RSE5	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.650
B3RIJ4_TRIAD	B3S7D7_TRIAD	B3RIJ4	B3S7D7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.650
B3RIJ4_TRIAD	B3SBV6_TRIAD	B3RIJ4	B3SBV6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.631
B3RIJ4_TRIAD	B3SC12_TRIAD	B3RIJ4	B3SC12	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.421
B3RIJ4_TRIAD	B3SCV4_TRIAD	B3RIJ4	B3SCV4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.859
B3RIM1_TRIAD	B3RVC9_TRIAD	B3RIM1	B3RVC9	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.530
B3RIM1_TRIAD	B3SC12_TRIAD	B3RIM1	B3SC12	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.448
B3RIS6_TRIAD	B3RNC4_TRIAD	B3RIS6	B3RNC4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.660
B3RIS6_TRIAD	B3RP53_TRIAD	B3RIS6	B3RP53	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.616
B3RIS6_TRIAD	B3RPR1_TRIAD	B3RIS6	B3RPR1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.472
B3RIS6_TRIAD	B3RPU4_TRIAD	B3RIS6	B3RPU4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.421
B3RIS6_TRIAD	B3RQA4_TRIAD	B3RIS6	B3RQA4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.443
B3RIS6_TRIAD	B3RRU3_TRIAD	B3RIS6	B3RRU3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.444
B3RIS6_TRIAD	B3RU71_TRIAD	B3RIS6	B3RU71	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.421
B3RIS6_TRIAD	B3RVA8_TRIAD	B3RIS6	B3RVA8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.577
B3RIS6_TRIAD	B3RVT3_TRIAD	B3RIS6	B3RVT3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.558
B3RIS6_TRIAD	B3RWS3_TRIAD	B3RIS6	B3RWS3	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA helicase.	0.573