Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAA11240.1 | GAA13022.1 | GOALK_026_00460 | GOALK_065_00070 | Putative AraC family transcriptional regulator. | Putative Xre family DNA-binding protein. | 0.468 |
| GAA11240.1 | GAA15144.1 | GOALK_026_00460 | GOALK_121_00060 | Putative AraC family transcriptional regulator. | Putative DNA repair helicase. | 0.813 |
| GAA11240.1 | rpoZ | GOALK_026_00460 | GOALK_017_00140 | Putative AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.874 |
| GAA11240.1 | sigA | GOALK_026_00460 | GOALK_021_00080 | Putative AraC family transcriptional regulator. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.809 |
| GAA11240.1 | sigB | GOALK_026_00460 | GOALK_021_00010 | Putative AraC family transcriptional regulator. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.809 |
| GAA12361.1 | GAA15144.1 | GOALK_050_02160 | GOALK_121_00060 | Hypothetical protein. | Putative DNA repair helicase. | 0.816 |
| GAA12361.1 | rbpA | GOALK_050_02160 | GOALK_099_00450 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.992 |
| GAA12361.1 | rpoZ | GOALK_050_02160 | GOALK_017_00140 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.979 |
| GAA12361.1 | sigA | GOALK_050_02160 | GOALK_021_00080 | Hypothetical protein. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.967 |
| GAA12361.1 | sigB | GOALK_050_02160 | GOALK_021_00010 | Hypothetical protein. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.967 |
| GAA12361.1 | whiB-4 | GOALK_050_02160 | GOALK_097_00020 | Hypothetical protein. | Putative WhiB family regulatory protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.850 |
| GAA12361.1 | whiB-5 | GOALK_050_02160 | GOALK_097_00300 | Hypothetical protein. | Putative WhiB family regulatory protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.414 |
| GAA13022.1 | GAA11240.1 | GOALK_065_00070 | GOALK_026_00460 | Putative Xre family DNA-binding protein. | Putative AraC family transcriptional regulator. | 0.468 |
| GAA13022.1 | GAA15144.1 | GOALK_065_00070 | GOALK_121_00060 | Putative Xre family DNA-binding protein. | Putative DNA repair helicase. | 0.849 |
| GAA13022.1 | rpoZ | GOALK_065_00070 | GOALK_017_00140 | Putative Xre family DNA-binding protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.407 |
| GAA13022.1 | sigA | GOALK_065_00070 | GOALK_021_00080 | Putative Xre family DNA-binding protein. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.836 |
| GAA13022.1 | sigB | GOALK_065_00070 | GOALK_021_00010 | Putative Xre family DNA-binding protein. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.836 |
| GAA14839.1 | GAA14840.1 | GOALK_117_00710 | GOALK_117_00720 | Putative MerR family transcriptional regulator. | Hypothetical protein. | 0.813 |
| GAA14839.1 | GAA14841.1 | GOALK_117_00710 | GOALK_117_00730 | Putative MerR family transcriptional regulator. | Putative MerR family transcriptional regulator. | 0.740 |
| GAA14839.1 | rpoZ | GOALK_117_00710 | GOALK_017_00140 | Putative MerR family transcriptional regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.481 |
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