STRINGSTRING
SLJ83619.1 SLJ83619.1 SLJ83893.1 SLJ83893.1 btuB btuB exbD1 exbD1 exbB1 exbB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLJ83619.1Outer membrane transport energization protein TonB. (190 aa)
SLJ83893.1Gram-negative bacterial tonB protein, C-terminal; Hypothetical protein. (295 aa)
btuBTonB-dependent vitamin B12 receptor; Outer membrane cobalamin translocator, beta-barrel; High confidence in function and specificity. (636 aa)
exbD1Biopolymer transport protein ExbD/TolR, Protein of unknown function (DUF3485); Hypothetical protein. (143 aa)
exbB1MotA/TolQ/ExbB proton channel; Conserved hypothetical protein. (242 aa)
Your Current Organism:
Psychrobacter sp. DABAL43B
NCBI taxonomy Id: 1028416
Other names: P. sp. DAB_AL43B, Psychrobacter sp. DAB_AL43B
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