STRINGSTRING
SLJ83260.1 SLJ83260.1 dsbB dsbB SLJ83284.1 SLJ83284.1 SLJ83285.1 SLJ83285.1 dsbA dsbA SLJ83403.1 SLJ83403.1 dsbC dsbC smpA smpA SLJ83869.1 SLJ83869.1 SLJ83871.1 SLJ83871.1 yfgL yfgL surA1 surA1 SLJ84209.1 SLJ84209.1 cca cca SLJ84520.1 SLJ84520.1 lptA lptA SLJ84522.1 SLJ84522.1 bamD bamD sspA sspA sspB sspB ppiD ppiD ostA ostA surA3 surA3 bamA bamA orn orn SLJ85440.1 SLJ85440.1 SLJ85467.1 SLJ85467.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLJ83260.1Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (340 aa)
dsbBDisulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (174 aa)
SLJ83284.1ABC transporter permease protiein YjgP/YjgQ; Specificity unclear. (429 aa)
SLJ83285.1ABC transporter permease protiein YjgP/YjgQ; Specificity unclear. (402 aa)
dsbADSBA-like thioredoxin domain; High confidence in function and specificity. (206 aa)
SLJ83403.1Hypothetical protein. (106 aa)
dsbCThiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (284 aa)
smpAOuter membrane lipoprotein omlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (138 aa)
SLJ83869.1LPS-assembly lipoprotein. (239 aa)
SLJ83871.1Hypothetical protein; High confidence in function and specificity; Belongs to the ArsC family. (125 aa)
yfgLPyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (402 aa)
surA1Peptidyl-prolyl cis-trans isomerase C; Foldase protein prsA 3; High confidence in function and specificity. (372 aa)
SLJ84209.1Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (303 aa)
ccaCCA tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. (400 aa)
SLJ84520.1Hypothetical protein. (194 aa)
lptALipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. (189 aa)
SLJ84522.1ABC transporter-like; High confidence in function and specificity. (259 aa)
bamDLipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (361 aa)
sspAStringent starvation protein A; Glutathione S-transferase/chloride channel, C-terminal, Transposase DDE domain; High confidence in function and specificity. (204 aa)
sspBStringent starvation protein B; High confidence in function and specificity. (144 aa)
ppiDPeptidyl-prolyl cis-trans isomerase D; SurA N-terminal, PPIC-type PPIASE domain; High confidence in function and specificity. (624 aa)
ostALPS-assembly protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (1037 aa)
surA3Peptidyl-prolyl cis-trans isomerase SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (466 aa)
bamAPutative bacterial surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (808 aa)
ornOligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. (195 aa)
SLJ85440.1Major facilitator superfamily domain; High confidence in function and specificity. (454 aa)
SLJ85467.1Permease; Cytochrome c assembly protein; Conserved hypothetical protein. (268 aa)
Your Current Organism:
Psychrobacter sp. DABAL43B
NCBI taxonomy Id: 1028416
Other names: P. sp. DAB_AL43B, Psychrobacter sp. DAB_AL43B
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