STRINGSTRING
PSCI_1314 PSCI_1314 PSCI_1315 PSCI_1315 PSCI_1316 PSCI_1316 soxB1 soxB1 PSCI_4794 PSCI_4794 PSCI_4795 PSCI_4795 PSCI_4797 PSCI_4797
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSCI_1314Sarcosine oxidase, gamma subunit, heterotetrameric. (210 aa)
PSCI_1315Sarcosine oxidase, alpha subunit, heterotetrameric; Belongs to the GcvT family. (1006 aa)
PSCI_1316Sarcosine oxidase, delta subunit. (98 aa)
soxB1Sarcosine oxidase subunit beta. (416 aa)
PSCI_4794Sarcosine oxidase beta subunit family protein. (413 aa)
PSCI_4795Sarcosine oxidase, delta subunit family protein. (100 aa)
PSCI_4797Sarcosine oxidase subunit gamma. (191 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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