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fadE fadE ppc ppc acsA2 acsA2 PSCI_0318 PSCI_0318 fumC-2 fumC-2 PSCI_0446 PSCI_0446 leuA leuA PSCI_0548 PSCI_0548 PSCI_0641 PSCI_0641 PSCI_0756 PSCI_0756 PSCI_0757 PSCI_0757 pdhA pdhA PSCI_0780 PSCI_0780 PSCI_0787 PSCI_0787 mqo mqo PSCI_0905 PSCI_0905 ilvC ilvC ilvH ilvH PSCI_0961 PSCI_0961 acs_2 acs_2 PSCI_1069 PSCI_1069 PSCI_1095 PSCI_1095 PSCI_1218 PSCI_1218 PSCI_1259 PSCI_1259 PSCI_1260 PSCI_1260 PSCI_1261 PSCI_1261 PSCI_1262 PSCI_1262 PSCI_1263 PSCI_1263 PSCI_1266 PSCI_1266 PSCI_1282 PSCI_1282 PSCI_1284 PSCI_1284 glcB glcB PSCI_1372 PSCI_1372 PSCI_1373 PSCI_1373 pckA pckA mqo-2 mqo-2 PSCI_1560 PSCI_1560 PSCI_1832 PSCI_1832 PSCI_1833 PSCI_1833 PSCI_1875 PSCI_1875 gcdH gcdH PSCI_1949 PSCI_1949 gabD gabD gabT gabT PSCI_2053 PSCI_2053 PSCI_2055 PSCI_2055 ilvD ilvD PSCI_2228 PSCI_2228 PSCI_2274 PSCI_2274 aceF aceF aceE aceE PSCI_2428 PSCI_2428 PSCI_2429 PSCI_2429 PSCI_2434 PSCI_2434 PSCI_2602 PSCI_2602 fumC fumC PSCI_2927 PSCI_2927 PSCI_3093 PSCI_3093 accA accA maeA maeA aceK aceK PSCI_3340 PSCI_3340 PSCI_3356 PSCI_3356 PSCI_3358 PSCI_3358 PSCI_3391 PSCI_3391 PSCI_3557 PSCI_3557 PSCI_3559 PSCI_3559 PSCI_3560 PSCI_3560 PSCI_3561 PSCI_3561 PSCI_3579 PSCI_3579 PSCI_3611 PSCI_3611 PSCI_3612 PSCI_3612 acnA acnA PSCI_3716 PSCI_3716 leuC leuC leuD leuD leuB leuB PSCI_3822 PSCI_3822 PSCI_3823 PSCI_3823 etfA-2 etfA-2 gltA gltA PSCI_3833 PSCI_3833 PSCI_3834 PSCI_3834 sdhA sdhA sdhB sdhB sucA sucA PSCI_3838 PSCI_3838 PSCI_3839 PSCI_3839 sucC sucC sucD sucD PSCI_3974 PSCI_3974 PSCI_4152 PSCI_4152 PSCI_4232 PSCI_4232 PSCI_4285 PSCI_4285 PSCI_4286 PSCI_4286 PSCI_4318 PSCI_4318 PSCI_4460 PSCI_4460 PSCI_4507 PSCI_4507 lldD lldD PSCI_4565 PSCI_4565 PSCI_4610 PSCI_4610 PSCI_4611 PSCI_4611 PSCI_4834 PSCI_4834 prpB prpB PSCI_4907 PSCI_4907 mqo-3 mqo-3 PSCI_4976 PSCI_4976 accC2 accC2 PSCI_4978 PSCI_4978 PSCI_5021 PSCI_5021 icd icd icd-2 icd-2 PSCI_5422 PSCI_5422 PSCI_5466 PSCI_5466 PSCI_5467 PSCI_5467 fadA fadA fadB fadB PSCI_5519 PSCI_5519 PSCI_5564 PSCI_5564 PSCI_5565 PSCI_5565 PSCI_5566 PSCI_5566 accD accD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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fadEacyl-CoA dehydrogenase. (815 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (878 aa)
acsA2acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
PSCI_0318Aminotransferase AlaT. (403 aa)
fumC-2Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
PSCI_0446Acetolactate synthase; Belongs to the TPP enzyme family. (533 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (558 aa)
PSCI_0548Carboxyphosphonoenolpyruvate phosphonomutase. (289 aa)
PSCI_0641Branched-chain amino acid aminotransferase. (339 aa)
PSCI_0756Branched-chain alpha-keto acid dehydrogenase subunit E2. (367 aa)
PSCI_0757Pyruvate dehydrogenase E1 component subunit beta. (328 aa)
pdhAPyruvate dehydrogenase complex, E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (365 aa)
PSCI_0780Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (696 aa)
PSCI_0787long-chain-fatty-acid-CoA ligase. (560 aa)
mqoMalate:quinone oxidoreductase. (503 aa)
PSCI_0905Acetolactate synthase; Belongs to the TPP enzyme family. (552 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (338 aa)
ilvHAcetolactate synthase 3 regulatory subunit. (163 aa)
PSCI_0961Acetolactate synthase 3 catalytic subunit. (566 aa)
acs_2acetate-CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
PSCI_10693-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (295 aa)
PSCI_1095acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
PSCI_1218Putative lipoate-protein ligase A. (235 aa)
PSCI_1259hydroxymethylglutaryl-CoA lyase. (301 aa)
PSCI_1260Biotin carboxylase. (634 aa)
PSCI_1261gamma-carboxygeranoyl-CoA hydratase. (262 aa)
PSCI_1262propionyl-CoA carboxylase. (540 aa)
PSCI_1263isovaleryl-CoA dehydrogenase. (391 aa)
PSCI_1266acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
PSCI_1282acyl-CoA dehydrogenase domain-containing protein. (591 aa)
PSCI_1284acyl-CoA dehydrogenase. (601 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (724 aa)
PSCI_1372L(+)-tartrate dehydratase subunit beta. (207 aa)
PSCI_1373Tartrate dehydratase subunit alpha. (299 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (514 aa)
mqo-2Malate:quinone oxidoreductase. (547 aa)
PSCI_1560Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
PSCI_1832Pyruvate carboxylase subunit A. (477 aa)
PSCI_1833Pyruvate carboxylase subunit B. (602 aa)
PSCI_1875Coenzyme A transferase PsecoA. (497 aa)
gcdHglutaryl-CoA dehydrogenase. (413 aa)
PSCI_1949D-isomer specific 2-hydroxyacid dehydrogenase. (332 aa)
gabDSuccinate-semialdehyde dehydrogenase I; Belongs to the aldehyde dehydrogenase family. (480 aa)
gabT4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
PSCI_2053FAD linked oxidase domain-containing protein. (463 aa)
PSCI_2055Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (579 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (613 aa)
PSCI_2228NADP-dependent malic enzyme. (422 aa)
PSCI_2274Biotin carboxylase/biotin carboxyl carrier protein. (578 aa)
aceFDihydrolipoamide acetyltransferase, E2 component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (548 aa)
aceEPyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (881 aa)
PSCI_2428acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa)
PSCI_2429acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (155 aa)
PSCI_2434Beta alanine-pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
PSCI_2602acyl-CoA dehydrogenase domain-containing protein. (549 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (458 aa)
PSCI_2927Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
PSCI_3093MaoC-like domain-containing protein. (156 aa)
accAacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (315 aa)
maeAMalate dehydrogenase. (563 aa)
aceKIsocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. (571 aa)
PSCI_3340Tartrate dehydrogenase. (350 aa)
PSCI_33564-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
PSCI_3358Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)
PSCI_3391Putative uncharacterized protein. (194 aa)
PSCI_3557Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
PSCI_35593-hydroxyacyl-CoA dehydrogenase. (506 aa)
PSCI_3560enoyl-CoA hydratase. (263 aa)
PSCI_3561enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
PSCI_3579Malate synthase G. (548 aa)
PSCI_3611acyl-CoA dehydrogenase. (383 aa)
PSCI_3612enoly-CoA hydratase/isomerase family protein. (385 aa)
acnAAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (914 aa)
PSCI_3716enoyl-CoA hydratase. (229 aa)
leuCIsopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (474 aa)
leuDIsopropylmalate isomerase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (213 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (360 aa)
PSCI_3822Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (551 aa)
PSCI_3823Electron transfer flavoprotein subunit beta. (249 aa)
etfA-2Electron transfer flavoprotein subunit alpha. (309 aa)
gltAType II citrate synthase; Belongs to the citrate synthase family. (429 aa)
PSCI_3833Succinate dehydrogenase, cytochrome b556 subunit. (85 aa)
PSCI_3834Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (570 aa)
sdhBSuccinate dehydrogenase iron-sulfur subunit. (234 aa)
sucA2-oxoglutarate dehydrogenase E1 component. (938 aa)
PSCI_3838Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (413 aa)
PSCI_3839Dihydrolipoamide dehydrogenase. (478 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
PSCI_3974NAD-dependent aldehyde dehydrogenase. (476 aa)
PSCI_4152Zinc-containing alcohol dehydrogenase superfamily protein. (331 aa)
PSCI_4232Pyruvate dehydrogenase; Belongs to the TPP enzyme family. (572 aa)
PSCI_4285acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
PSCI_42862-ketocyclohexanecarboxyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
PSCI_4318enoyl-CoA hydratase. (270 aa)
PSCI_4460acyl-CoA dehydrogenase. (388 aa)
PSCI_4507Methylmalonate-semialdehyde dehydrogenase. (499 aa)
lldDAlpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. (378 aa)
PSCI_4565Lactaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
PSCI_46103-hydroxyisobutyrate dehydrogenase family protein. (296 aa)
PSCI_4611Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (505 aa)
PSCI_4834Methylcitrate synthase; Belongs to the citrate synthase family. (375 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (297 aa)
PSCI_4907Tartrate dehydrogenase. (356 aa)
mqo-3Malate:quinone oxidoreductase. (548 aa)
PSCI_4976Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (156 aa)
accC2acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (451 aa)
PSCI_4978Biotin/lipoyl attachment domain-containing protein. (141 aa)
PSCI_5021Aldehyde dehydrogenase family protein. (463 aa)
icdIsocitrate dehydrogenase, NADP-dependent. (420 aa)
icd-2Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (741 aa)
PSCI_5422Isocitrate lyase. (441 aa)
PSCI_54663-oxoacid CoA-transferase subunit A family protein. (232 aa)
PSCI_54673-oxoacid CoA-transferase. (218 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
fadBMultifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (721 aa)
PSCI_5519Aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (869 aa)
PSCI_5564o-succinylbenzoate-CoA ligase. (497 aa)
PSCI_5565NADPH:quinone reductase. (340 aa)
PSCI_5566enoyl-CoA hydratase/isomerase. (233 aa)
accDacetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (308 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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