STRINGSTRING
PSCI_3705 PSCI_3705 kdsB kdsB lpxK lpxK lpxL lpxL PSCI_0143 PSCI_0143 PSCI_0195 PSCI_0195 PSCI_0336 PSCI_0336 PSCI_0337 PSCI_0337 PSCI_0338 PSCI_0338 PSCI_0369 PSCI_0369 PSCI_0721 PSCI_0721 PSCI_0722 PSCI_0722 PSCI_0723 PSCI_0723 PSCI_0724 PSCI_0724 PSCI_0725 PSCI_0725 PSCI_0726 PSCI_0726 PSCI_0727 PSCI_0727 PSCI_0729 PSCI_0729 PSCI_0730 PSCI_0730 algF algF PSCI_0732 PSCI_0732 PSCI_0776 PSCI_0776 pgi pgi PSCI_1152 PSCI_1152 PSCI_1389 PSCI_1389 pckA pckA PSCI_1481 PSCI_1481 PSCI_1484 PSCI_1484 PSCI_1490 PSCI_1490 PSCI_1534 PSCI_1534 PSCI_1535 PSCI_1535 PSCI_1537 PSCI_1537 PSCI_1538 PSCI_1538 PSCI_1539 PSCI_1539 PSCI_1547 PSCI_1547 PSCI_1587 PSCI_1587 PSCI_1630 PSCI_1630 PSCI_1695 PSCI_1695 PSCI_1699 PSCI_1699 glmU glmU PSCI_1802 PSCI_1802 mdoD mdoD PSCI_1937 PSCI_1937 PSCI_1938 PSCI_1938 rfbA1 rfbA1 PSCI_1940 PSCI_1940 fbp fbp mdoG mdoG opgH opgH PSCI_2300 PSCI_2300 PSCI_2309 PSCI_2309 PSCI_2310 PSCI_2310 PSCI_2311 PSCI_2311 PSCI_2312 PSCI_2312 PSCI_2313 PSCI_2313 PSCI_2318 PSCI_2318 PSCI_2319 PSCI_2319 PSCI_2321 PSCI_2321 PSCI_2332 PSCI_2332 tpiA tpiA PSCI_2816 PSCI_2816 PSCI_2817 PSCI_2817 lpxC lpxC PSCI_2865 PSCI_2865 PSCI_2866 PSCI_2866 PSCI_2867 PSCI_2867 PSCI_2868 PSCI_2868 PSCI_2869 PSCI_2869 PSCI_2872 PSCI_2872 PSCI_2874 PSCI_2874 PSCI_2876 PSCI_2876 PSCI_2914 PSCI_2914 PSCI_2928 PSCI_2928 PSCI_2943 PSCI_2943 algU algU PSCI_3033 PSCI_3033 PSCI_3035 PSCI_3035 PSCI_3056 PSCI_3056 lpxD lpxD fabZ fabZ lpxA lpxA lpxB lpxB kdsA kdsA PSCI_3285 PSCI_3285 PSCI_3289 PSCI_3289 PSCI_3455 PSCI_3455 rfbG rfbG rfbC_2 rfbC_2 PSCI_3463 PSCI_3463 PSCI_3570 PSCI_3570 lpxH lpxH PSCI_3760 PSCI_3760 PSCI_3896 PSCI_3896 PSCI_3919 PSCI_3919 glgE glgE glgB glgB PSCI_4309 PSCI_4309 PSCI_4331 PSCI_4331 PSCI_4368 PSCI_4368 PSCI_4370 PSCI_4370 glgA glgA PSCI_4383 PSCI_4383 PSCI_4384 PSCI_4384 PSCI_4433 PSCI_4433 PSCI_4436 PSCI_4436 PSCI_4705 PSCI_4705 ppsA ppsA PSCI_4925 PSCI_4925 PSCI_5259 PSCI_5259 gmd gmd PSCI_5264 PSCI_5264 PSCI_5288 PSCI_5288 PSCI_5296 PSCI_5296 PSCI_5315 PSCI_5315 wssI wssI PSCI_5317 PSCI_5317 PSCI_5319 PSCI_5319 bscS bscS PSCI_5322 PSCI_5322 PSCI_5323 PSCI_5323 PSCI_5332 PSCI_5332 PSCI_5334 PSCI_5334 PSCI_5339 PSCI_5339 PSCI_5344 PSCI_5344 PSCI_5345 PSCI_5345 PSCI_5346 PSCI_5346 PSCI_5449 PSCI_5449 PSCI_5453 PSCI_5453 PSCI_5457 PSCI_5457 PSCI_5458 PSCI_5458 PSCI_5459 PSCI_5459 PSCI_5460 PSCI_5460 PSCI_5493 PSCI_5493 PSCI_5494 PSCI_5494 PSCI_5495 PSCI_5495 PSCI_5496 PSCI_5496 PSCI_5497 PSCI_5497 PSCI_5499 PSCI_5499 PSCI_5500 PSCI_5500 PSCI_5501 PSCI_5501 PSCI_5502 PSCI_5502 PSCI_5503 PSCI_5503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSCI_3705Sulfatase. (695 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (254 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (331 aa)
lpxLLipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (309 aa)
PSCI_0143L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (458 aa)
PSCI_0195Ser/Thr protein phosphatase family protein. (270 aa)
PSCI_0336Nucleotide sugar epimerase/dehydratase WbpM. (664 aa)
PSCI_0337Glycosyl transferase, group 4 family protein. (338 aa)
PSCI_0338UDP-glucose 4-epimerase. (275 aa)
PSCI_0369Putative uncharacterized protein. (159 aa)
PSCI_0721GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (438 aa)
PSCI_0722Alginate biosynthesis protein Alg8. (493 aa)
PSCI_0723Alginate biosynthesis protein Alg44. (390 aa)
PSCI_0724Alginate biosynthesis protein AlgK. (479 aa)
PSCI_0725Alginate biosynthesis protein AlgE. (502 aa)
PSCI_0726Parallel beta-helix repeat-containing protein. (536 aa)
PSCI_0727Alginate biosynthesis protein AlgX. (485 aa)
PSCI_0729Alginate biosynthesis protein AlgI; Belongs to the membrane-bound acyltransferase family. (517 aa)
PSCI_0730Alginate biosynthesis protein AlgJ. (390 aa)
algFAlginate biosynthesis protein AlgF. (227 aa)
PSCI_0732Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. (483 aa)
PSCI_0776Group 1 family glycosyl transferase. (390 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
PSCI_1152dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (289 aa)
PSCI_1389Sulfatase. (557 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (514 aa)
PSCI_1481Alginate regulatory protein AlgP. (328 aa)
PSCI_1484anti-RNA polymerase sigma 70 factor; Belongs to the Rsd/AlgQ family. (153 aa)
PSCI_1490Alginate biosynthesis regulatory protein AlgR. (248 aa)
PSCI_1534Sulfatase. (644 aa)
PSCI_1535UDP-glucose 6-dehydrogenase. (442 aa)
PSCI_1537Glycosyl transferase family protein. (247 aa)
PSCI_1538Lipid A biosynthesis. (93 aa)
PSCI_1539Glycosyl transferase family protein. (509 aa)
PSCI_1547Putative uncharacterized protein. (563 aa)
PSCI_1587Phosphomannomutase. (861 aa)
PSCI_1630Helix-turn-helix, Fis-type. (448 aa)
PSCI_1695Lipid A biosynthesis lauroyl acyltransferase. (295 aa)
PSCI_1699D,D-heptose 1,7-bisphosphate phosphatase. (180 aa)
glmUUDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (455 aa)
PSCI_1802Acyltransferase 3. (624 aa)
mdoDGlucan biosynthesis protein D; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (529 aa)
PSCI_1937dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (291 aa)
PSCI_1938dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
rfbA1Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (291 aa)
PSCI_1940dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (360 aa)
fbpFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (336 aa)
mdoGGlucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (611 aa)
opgHGlucosyltransferase MdoH; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (860 aa)
PSCI_2300L-serine dehydratase, iron-sulfur-dependent, single chain form. (458 aa)
PSCI_2309ADP-heptose:LPS heptosyltransferase II. (348 aa)
PSCI_2310Lipopolysaccharide heptosyltransferase I. (356 aa)
PSCI_2311Lipopolysaccharide core biosynthesis protein RfaG. (374 aa)
PSCI_2312Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. (268 aa)
PSCI_2313Lipopolysaccharide core biosynthesis protein. (244 aa)
PSCI_2318Glycosyl transferase, group 1 family protein. (376 aa)
PSCI_2319Mig-14 family protein. (298 aa)
PSCI_2321Putative glycosyltransferase group 1 protein. (318 aa)
PSCI_23323-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (424 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
PSCI_2816YrbI family phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (174 aa)
PSCI_2817Arabinose 5-phosphate isomerase. (324 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (303 aa)
PSCI_2865UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (406 aa)
PSCI_2866Oxidoreductase-like protein. (315 aa)
PSCI_2867Acetyltransferase. (194 aa)
PSCI_2868DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
PSCI_2869UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (361 aa)
PSCI_2872Glycosyl transferase, group 1. (985 aa)
PSCI_2874Group 1 glycosyl transferase. (403 aa)
PSCI_2876Glycosyl transferase, group 1. (415 aa)
PSCI_29143-beta hydroxysteroid dehydrogenase/isomerase family protein. (333 aa)
PSCI_29282-polyprenylphenol hydroxylase. (316 aa)
PSCI_2943Glycoside hydrolase family protein. (370 aa)
algURNA polymerase sigma factor AlgU; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
PSCI_3033Alginate regulatory protein MucA. (194 aa)
PSCI_3035Sigma E regulatory protein, MucB/RseB. (183 aa)
PSCI_3056Putative uncharacterized protein. (364 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (351 aa)
fabZ(3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (146 aa)
lpxAUDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (258 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (378 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. (281 aa)
PSCI_3285Putative uncharacterized protein. (322 aa)
PSCI_3289Hexapaptide repeat-containing transferase. (218 aa)
PSCI_3455Glycosyl transferase, group 2 family protein. (1190 aa)
rfbGCDP-glucose 4,6-dehydratase. (360 aa)
rfbC_2dTDP-4-dehydrorhamnose 3,5-epimerase. (186 aa)
PSCI_3463Glycosyltransferase, group 2 family. (975 aa)
PSCI_3570Putative pyridine nucleotide-disulfide oxidoreductase. (474 aa)
lpxHUDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (248 aa)
PSCI_3760Aldo/keto reductase. (322 aa)
PSCI_3896Acyltransferase 3. (361 aa)
PSCI_3919Glycosyl transferase, group 2 family protein. (308 aa)
glgEGlycosy hydrolase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (672 aa)
glgB1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (741 aa)
PSCI_4309Glycosyltransferase. (437 aa)
PSCI_4331Acyltransferase 3. (339 aa)
PSCI_4368Maltooligosyl trehalose synthase. (925 aa)
PSCI_4370Malto-oligosyltrehalose trehalohydrolase. (590 aa)
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (531 aa)
PSCI_4383UDP-glucose 6-dehydrogenase. (453 aa)
PSCI_4384UTP-glucose-1-phosphate uridylyltransferase. (279 aa)
PSCI_4433Oxidoreductase protein. (275 aa)
PSCI_4436Ser/Thr protein phosphatase family protein. (381 aa)
PSCI_4705Putative uncharacterized protein. (258 aa)
ppsAPhosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (827 aa)
PSCI_4925Membrane protein. (540 aa)
PSCI_5259Glycosyl transferase group 1. (1118 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (348 aa)
PSCI_5264Glycosyl transferase, group 1. (369 aa)
PSCI_5288SMP-30/gluconolaconase/LRE domain-containing protein. (296 aa)
PSCI_5296UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (422 aa)
PSCI_5315Alginate biosynthesis protein AlgI-like; Belongs to the membrane-bound acyltransferase family. (467 aa)
wssICell morphology protein. (377 aa)
PSCI_5317Cellulose acetylase subunit WssH; Belongs to the membrane-bound acyltransferase family. (471 aa)
PSCI_5319Cellulose biosynthesis protein. (220 aa)
bscSCellulose synthase operon protein C. (1349 aa)
PSCI_5322Cyclic di-GMP binding protein WssC; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (755 aa)
PSCI_5323Cellulose synthase catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. (739 aa)
PSCI_5332Glycosyl transferase, group 1 family protein. (379 aa)
PSCI_5334Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (472 aa)
PSCI_5339Glycosyl transferase, group 2 family protein. (327 aa)
PSCI_5344Glycosyl transferase group 1. (379 aa)
PSCI_5345GDP-6-deoxy-D-lyxo-4-hexulose reductase. (315 aa)
PSCI_5346O-antigen acetylase. (682 aa)
PSCI_5449Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (370 aa)
PSCI_5453Protein-tyrosine kinase. (738 aa)
PSCI_5457Glycosyl transferase, group 1 family protein. (409 aa)
PSCI_5458Glycosyl transferase, group 1 family protein. (361 aa)
PSCI_5459Mannosyltransferase. (401 aa)
PSCI_5460Capsular polysaccharide biosynthesis protein. (467 aa)
PSCI_5493Capsular polysaccharide biosynthesis protein. (478 aa)
PSCI_5494Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (485 aa)
PSCI_5495Polysaccharide biosynthesis/export protein. (266 aa)
PSCI_5496Lipopolysaccharide biosynthesis. (663 aa)
PSCI_5497Glycosyl transferase, group 1 family protein. (392 aa)
PSCI_5499Glycosyl transferase, group 1. (410 aa)
PSCI_5500Glycosyl transferase, group 1 family protein. (366 aa)
PSCI_5501Membrane protein PslJ. (471 aa)
PSCI_5502Hexapeptide repeat-containing transferase. (273 aa)
PSCI_5503MviN family membrane protein. (471 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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