STRINGSTRING
PSCI_4927 PSCI_4927 PSCI_3377 PSCI_3377 PSCI_2949 PSCI_2949 catI catI PSCI_4349 PSCI_4349 PSCI_5466 PSCI_5466 PSCI_5467 PSCI_5467 PSCI_4926 PSCI_4926
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSCI_4927Muconolactone Delta-isomerase. (96 aa)
PSCI_3377Sigma factor sigB regulation protein rsbQ. (272 aa)
PSCI_29493-oxoadipate:succinyl-CoA transferase, subunit B. (259 aa)
catI3-oxoadipate:succinyl-CoA transferase subunit A. (286 aa)
PSCI_4349Alpha/beta hydrolase fold protein. (263 aa)
PSCI_54663-oxoacid CoA-transferase subunit A family protein. (232 aa)
PSCI_54673-oxoacid CoA-transferase. (218 aa)
PSCI_4926Catechol 1,2-dioxygenase. (309 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.