STRINGSTRING
PSCI_4753 PSCI_4753 PSCI_1800 PSCI_1800 PSCI_3817 PSCI_3817 PSCI_5216 PSCI_5216
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSCI_4753Mandelate racemase/muconate lactonizing protein. (389 aa)
PSCI_1800Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (424 aa)
PSCI_3817Galactonate dehydratase. (382 aa)
PSCI_5216Glucarate dehydratase. (447 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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