STRINGSTRING
PSCI_1095 PSCI_1095 PSCI_1266 PSCI_1266 PSCI_1560 PSCI_1560 PSCI_2950 PSCI_2950 PSCI_3557 PSCI_3557 PSCI_4285 PSCI_4285 fadA fadA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSCI_1095acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
PSCI_1266acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
PSCI_1560Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
PSCI_2950Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
PSCI_3557Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
PSCI_4285acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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