STRINGSTRING
CINS_0035 CINS_0035 CINS_0036 CINS_0036 CINS_0037 CINS_0037 CINS_0038 CINS_0038 CINS_0039 CINS_0039 CINS_0040 CINS_0040 CINS_0058 CINS_0058 rnhB rnhB CINS_0145 CINS_0145 CINS_0147 CINS_0147 ccpA ccpA CINS_0167 CINS_0167 CINS_0168 CINS_0168 CINS_0169 CINS_0169 CINS_0170 CINS_0170 CINS_0171 CINS_0171 bamA bamA tsaB tsaB mcrC mcrC CINS_0233 CINS_0233 galU galU CINS_0255 CINS_0255 CINS_0298 CINS_0298 CINS_0355 CINS_0355 cadF cadF CINS_0372 CINS_0372 ctsD ctsD ctsX ctsX ctsE ctsE ctsF ctsF CINS_0377 CINS_0377 CINS_0378 CINS_0378 flgN flgN flgM flgM CINS_0384 CINS_0384 CINS_0385 CINS_0385 CINS_0386 CINS_0386 CINS_0387 CINS_0387 CINS_0390 CINS_0390 CINS_0391 CINS_0391 fldA fldA CINS_0405 CINS_0405 lolA lolA CINS_0469 CINS_0469 CINS_0476 CINS_0476 CINS_0477 CINS_0477 CINS_0478 CINS_0478 CINS_0479 CINS_0479 CINS_0480 CINS_0480 dsbA dsbA astA astA flhB2 flhB2 CINS_0497 CINS_0497 CINS_0498 CINS_0498 CINS_0499 CINS_0499 CINS_0500 CINS_0500 CINS_0502 CINS_0502 lepB lepB CINS_0509 CINS_0509 ate ate CINS_0515 CINS_0515 CINS_0533 CINS_0533 exbD exbD exbB exbB cfrA cfrA cccA cccA CINS_0570 CINS_0570 lptD lptD CINS_0572 CINS_0572 chuZ chuZ CINS_0644 CINS_0644 CINS_0645 CINS_0645 CINS_0646 CINS_0646 CINS_0726 CINS_0726 tsaE tsaE CINS_0777 CINS_0777 CINS_0785 CINS_0785 CINS_0786 CINS_0786 cft cft CINS_0788 CINS_0788 CINS_0789 CINS_0789 CINS_0798 CINS_0798 CINS_0846 CINS_0846 acd acd CINS_0877 CINS_0877 CINS_0878 CINS_0878 CINS_0888 CINS_0888 CINS_0889 CINS_0889 CINS_0891 CINS_0891 CINS_0892 CINS_0892 CINS_0893 CINS_0893 CINS_0895 CINS_0895 ybbB ybbB CINS_0906 CINS_0906 CINS_0907 CINS_0907 CINS_0908 CINS_0908 CINS_0928 CINS_0928 CINS_0940 CINS_0940 CINS_0943 CINS_0943 CINS_0944 CINS_0944 CINS_0953 CINS_0953 CINS_0959 CINS_0959 CINS_1054 CINS_1054 ctsW ctsW mutS2 mutS2 CINS_1117 CINS_1117 CINS_1119 CINS_1119 CINS_1145 CINS_1145 CINS_1177 CINS_1177 hup hup CINS_1185 CINS_1185 CINS_1234 CINS_1234 CINS_1235 CINS_1235 CINS_1257 CINS_1257 CINS_1311 CINS_1311 CINS_1433 CINS_1433 CINS_1434 CINS_1434 rnc rnc rnhA rnhA CINS_1438 CINS_1438 CINS_1441 CINS_1441 CINS_1442 CINS_1442 CINS_1461 CINS_1461 CINS_1466 CINS_1466 ctsG ctsG tsaD tsaD CINS_1469 CINS_1469 CINS_1472 CINS_1472 CINS_1473 CINS_1473 CINS_1497 CINS_1497
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CINS_0035Metal ion ABC transporter, membrane protein; Pfam match to PF00950.12 ABC-3. (272 aa)
CINS_0036Metal ion ABC transporter, ATP-binding protein; Pfam match to PF00005.22 ABC_tran. (249 aa)
CINS_0037Metal ion ABC transporter, permease protein; Pfam matches to PF03824.11 NicO, and to PF06226.8 DUF1007; Belongs to the NiCoT transporter (TC 2.A.52) family. (443 aa)
CINS_0038Metal ion ABC transporter, periplasmic metal-binding protein; Pfam match to PF01297.12 TroA. (283 aa)
CINS_0039Transcriptional regulator, Fur family; Pfam match to PF01475.14 FUR. (116 aa)
CINS_0040SAM-dependent methyltransferase; Pfam match to PF13847.1 Methyltransf_31. (236 aa)
CINS_0058ATPase, AAA family (DUF4143 domain). (351 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (183 aa)
CINS_0145Hypothetical protein. (216 aa)
CINS_0147Na+/H+ exchanger family protein; Pfam match to PF00999.16 Na_H_Exchanger. (395 aa)
ccpAPeriplasmic diheme cytochrome c peroxidase; Pfam matches to PF03150.9 CCP_MauG, and to PF00034.16 Cytochrom_C. (343 aa)
CINS_0167Putative lipoprotein. (448 aa)
CINS_0168Putative periplasmic lipoprotein (DUF1425 domain); Pfam match to PF07233.7 DUF1425. (107 aa)
CINS_0169Hypothetical lipoprotein (DUF3897 domain); Pfam match to PF13036.1 DUF3897. (209 aa)
CINS_0170Hypothetical protein. (441 aa)
CINS_0171Hypothetical protein; Pfam match to PF02169.11 LPP20. (385 aa)
bamABeta-barrel assembly machinery complex, BamA/YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (738 aa)
tsaBN6-L-threonylcarbamoyladenine synthase, TsaB subunit; Pfam match to PF00814.20 Peptidase_M22. (145 aa)
mcrCMcrBC 5-methylcytosine restriction system, component McrC; Pfam match to PF10117.4 McrBC. (451 aa)
CINS_0233Putative SmpA / OmlA family lipoprotein; Pfam match to PF04355.8 SmpA_OmlA. (129 aa)
galUUTP--glucose-1-phosphate uridylyltransferase; Pfam match to PF00483.18 NTP_transferase. (274 aa)
CINS_0255Phosphomannomutase/phosphoglucomutase; Bifunctional; Pfam matches to PF02878.11 PGM_PMM_I, and to PF02879.11 PGM_PMM_II, and to PF02880.11 PGM_PMM_III, and to PF00408.15 PGM_PMM_IV. (455 aa)
CINS_0298Putative two-domain glycosyltransferase; Pfam match to PF12804.2 NTP_transf_3. (491 aa)
CINS_0355Hypothetical protein (DUF507 domain); Pfam match to PF04368.8 DUF507. (183 aa)
cadFOuter membrane fibronectin-binding protein; Pfam matches to PF00691.15 OmpA, and to PF13505.1 OMP_b-brl. (325 aa)
CINS_0372Hypothetical protein. (108 aa)
ctsDTransformation system, type II secretion system secretin protein CtsD; Pfam matches to PF00263.16 Secretin, and to PF07660.9 STN; 5' truncation, possible pseudogene; Belongs to the bacterial secretin family. (421 aa)
ctsXTransformation system, membrane protein CtsX; Pfam match to PF12895.2 Apc3. (111 aa)
ctsETransformation system, type II secretion system ATPase CtsE; Pfam matches to PF00437.15 T2SE, and to PF05157.10 T2SE_Nter. (516 aa)
ctsFTransformation system, type II secretion system membrane protein CtsF; Pfam matches to PF00482.18 T2SF, and to PF00482.18 T2SF. (392 aa)
CINS_0377Putative membrane protein, TauE/SafE family permease; Pfam match to PF01925.14 TauE. (250 aa)
CINS_0378Hypothetical protein (DUF2400 domain); Pfam match to PF09674.5 DUF2400. (249 aa)
flgNFlagellar biosynthesis protein FlgN; Pfam match to PF05130.7 FlgN. (144 aa)
flgMAnti-sigma factor FlgM; Pfam match to PF04316.8 FlgM. (68 aa)
CINS_0384RNA methyltransferase, RsmD family; Pfam match to PF03602.10 Cons_hypoth95. (218 aa)
CINS_0385Hypothetical protein. (131 aa)
CINS_0386Hypothetical protein. (230 aa)
CINS_0387Hypothetical protein (iron-sulfur cluster binding domain); Pfam match to PF13085.1 Fer2_3. (212 aa)
CINS_0390Hypothetical protein (DUF2325 domain); Pfam match to PF10087.4 DUF2325. (105 aa)
CINS_0391Hypothetical protein. (223 aa)
fldAFlavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (163 aa)
CINS_0405Hypothetical protein, possible uridylyltransferase GlnD. (786 aa)
lolAOuter membrane lipoprotein carrier protein; Pfam match to PF03548.10 LolA. (169 aa)
CINS_0469Putative RNA-binding protein (Jag domain); Pfam matches to PF14804.1 Jag_N, and to PF13083.1 KH_4. (277 aa)
CINS_0476Hypothetical protein. (404 aa)
CINS_0477acyl-CoA thioesterase; Pfam match to PF03061.17 4HBT. (126 aa)
CINS_0478Putative membrane protein; Pfam match to PF13576.1 Pentapeptide_3. (657 aa)
CINS_0479Type II restriction/modification enzyme, mod subunit; Pfam match to PF12950.2 TaqI_C. (200 aa)
CINS_0480Type II restriction endonuclease; Pfam match to PF07669.6 Eco57I. (1033 aa)
dsbAProtein disulfide oxidoreductase; Pfam match to PF13462.1 Thioredoxin_4. (216 aa)
astAArylsulfate sulfotransferase; Pfam match to PF05935.6 Arylsulfotrans. (614 aa)
flhB2FlhB C-terminus-related protein; Pfam match to PF01312.14 Bac_export_2. (87 aa)
CINS_0497Hypothetical protein (C-terminal FliK domain); Pfam match to PF02120.11 Flg_hook. (673 aa)
CINS_0498Major facilitator superfamily transporter, possible sugar permease; Pfam match to PF07690.11 MFS_1. (398 aa)
CINS_0499Putative membrane protein. (161 aa)
CINS_0500Putative ATPase-related protein; Pfam match to PF09527.5 ATPase_gene1. (92 aa)
CINS_0502Hypothetical protein, possible cytochrome c oxidase; Pfam match to PF13442.1 Cytochrome_CBB3. (114 aa)
lepBLeader peptidase (signal peptidase I); Pfam match to PF00717.18 Peptidase_S24; Belongs to the peptidase S26 family. (282 aa)
CINS_0509Hypothetical protein. (86 aa)
ateArginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (238 aa)
CINS_0515Hypothetical protein (DUF234 domain); Pfam match to PF03008.9 DUF234. (283 aa)
CINS_0533Energy transduction protein TonB; Pfam match to PF03544.9 TonB_C. (216 aa)
exbDTonB system transport protein ExbD; Pfam match to PF02472.11 ExbD. (129 aa)
exbBTonB system transport protein ExbB; Pfam match to PF01618.11 MotA_ExbB. (143 aa)
cfrAFerric enterobactin uptake receptor; Pfam matches to PF07715.10 Plug, and to PF00593.19 TonB_dep_Rec. (696 aa)
cccAPeriplasmic monoheme cytochrome c553; Pfam match to PF00034.16 Cytochrom_C. (100 aa)
CINS_0570Hypothetical protein (RDD domain); Pfam match to PF06271.7 RDD. (151 aa)
lptDPutative lipooligosaccharide transport system, OM component (LptD family); Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (677 aa)
CINS_0572Hypothetical protein, putative phosphoribosyltransferase; Pfam match to PF00156.22 Pribosyltran. (219 aa)
chuZIron-responsive cellular heme oxygenase; Pfam matches to PF10615.4 DUF2470, and to PF01243.15 Pyridox_oxidase. (250 aa)
CINS_0644Iron siderophore ABC transporter, permease protein; Pfam match to PF01032.13 FecCD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (218 aa)
CINS_0645Iron siderophore ABC transporter, ATP-binding protein; Pfam matches to PF00005.22 ABC_tran, and to PF01032.13 FecCD. (341 aa)
CINS_0646Iron siderophore ABC transporter, periplasmic iron-binding protein; Pfam match to PF01497.13 Peripla_BP_2. (266 aa)
CINS_0726Putative lipooligosaccharide transport system, ATP-binding component (LptB family); Pfam match to PF00005.22 ABC_tran. (241 aa)
tsaEN6-L-threonylcarbamoyladenine synthase, TsaE subunit; Pfam match to PF02367.12 UPF0079. (135 aa)
CINS_0777Hypothetical protein. (346 aa)
CINS_0785Hypothetical protein. (811 aa)
CINS_0786KAP family P-loop domain protein; Pfam match to PF07693.9 KAP_NTPase. (688 aa)
cftFerritin; Iron-storage protein. (164 aa)
CINS_0788Pfam match to PF00717.18 Peptidase_S24. (207 aa)
CINS_0789Thioredoxin-related protein, SoxW family; Pfam match to PF13098.1 Thioredoxin_2. (180 aa)
CINS_0798AsmA family protein (DUF3971 domain); Pfam matches to PF13109.1 AsmA_1, and to PF13116.1 DUF3971. (855 aa)
CINS_0846Pfam match to PF00717.18 Peptidase_S24. (209 aa)
acd1-aminocyclopropane-1-carboxylate deaminase; Pfam match to PF00291.20 PALP. (294 aa)
CINS_0877Hypothetical protein (OmpA/MotB domain); Pfam matches to PF00691.15 OmpA, and to PF13677.1 MotB_plug, and to PF04156.9 IncA. (320 aa)
CINS_0878Putative membrane protein; Pfam match to PF01618.11 MotA_ExbB. (443 aa)
CINS_0888Putative acyl esterase; Pfam matches to PF02129.13 Peptidase_S15, and to PF08530.5 PepX_C. (669 aa)
CINS_0889Major facilitator superfamily transporter; Pfam match to PF07690.11 MFS_1. (415 aa)
CINS_0891tRNA m6A37 methyltransferase TrmN6; Pfam match to PF05175.9 MTS; Belongs to the methyltransferase superfamily. (231 aa)
CINS_0892Hypothetical protein, predicted Fe-S cluster-containing protein; Pfam match to PF03692.10 CxxCxxCC. (123 aa)
CINS_0893Putative tetratricopeptide repeat lipoprotein. (411 aa)
CINS_0895HIT family hydrolase, FHIT branch; Pfam match to PF01230.18 HIT. (162 aa)
ybbBtRNA 2-selenouridine synthase; Pfam match to PF00581.15 Rhodanese; Belongs to the SelU family. (327 aa)
CINS_0906Hypothetical protein. (209 aa)
CINS_0907Hypothetical protein. (78 aa)
CINS_0908DHH-type phosphohydrolase; Pfam match to PF01368.15 DHH. (350 aa)
CINS_0928Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Pfam match to PF13525.1 YfiO. (218 aa)
CINS_0940Ankyrin domain protein; Pfam matches to PF12796.2 Ank_2, and to PF13637.1 Ank_4. (415 aa)
CINS_0943Putative lipooligosaccharide transport system, permease component (LptF family); Pfam match to PF03739.9 YjgP_YjgQ. (341 aa)
CINS_0944Peptidase A24 N-terminal domain protein, putative prepilin signal peptidase; Pfam match to PF06750.8 DiS_P_DiS. (251 aa)
CINS_0953Hypothetical protein, ArsC family; Pfam match to PF03960.10 ArsC; Belongs to the ArsC family. (109 aa)
CINS_0959Putative RNA-binding protein (KH domain); Pfam match to PF13083.1 KH_4. (80 aa)
CINS_1054Hypothetical protein. (419 aa)
ctsWTransformation system, predicted amidophosphoribosyltransferase CtsW; Pfam match to PF00156.22 Pribosyltran. (190 aa)
mutS2DNA mismatch binding protein, MutS2 family; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (732 aa)
CINS_1117Putative membrane protein. (115 aa)
CINS_1119Phosphoglycerol transferase; Pfam match to PF00884.18 Sulfatase. (657 aa)
CINS_1145Putative type II secretion system protein. (157 aa)
CINS_1177Competence protein, ComEC family; Pfam match to PF03772.11 Competence. (419 aa)
hupDNA-binding protein HU; Pfam match to PF00216.16 Bac_DNA_binding; Belongs to the bacterial histone-like protein family. (100 aa)
CINS_1185Hypothetical protein. (351 aa)
CINS_1234RecD-like DNA helicase (AAA domain); Pfam matches to PF13604.1 AAA_30, and to PF13538.1 UvrD_C_2. (898 aa)
CINS_1235Type II restriction endonuclease; Pfam match to PF07669.6 Eco57I. (1250 aa)
CINS_1257Hypothetical protein (SurA domain); Pfam matches to PF09312.6 SurA_N, and to PF13145.1 Rotamase_2. (275 aa)
CINS_1311Putative lipooligosaccharide transport system, permease component (LptG family); Pfam match to PF03739.9 YjgP_YjgQ. (353 aa)
CINS_1433Hypothetical membrane protein (UPF0126 domain); Pfam matches to PF03458.8 UPF0126, and to PF03458.8 UPF0126. (206 aa)
CINS_1434Hypothetical protein. (347 aa)
rncRibonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (222 aa)
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (146 aa)
CINS_1438Tetratricopeptide repeat protein; Pfam match to PF13414.1 TPR_11. (320 aa)
CINS_1441Hypothetical protein. (116 aa)
CINS_1442Hypothetical protein. (113 aa)
CINS_1461HD family hydrolase, possible ComGF family competence protein; Pfam match to PF13023.1 HD_3. (407 aa)
CINS_1466Multidrug ABC transporter, membrane protein/ATP-binding protein; Pfam matches to PF00005.22 ABC_tran, and to PF00664.18 ABC_membrane. (542 aa)
ctsGTransformation system, putative pseudopilin protein CtsG. (188 aa)
tsaDN6-L-threonylcarbamoyladenine synthase, TsaD subunit; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (335 aa)
CINS_1469Putative metallocarboxypeptidase, peptidase M14 family. (462 aa)
CINS_1472Hypothetical protein. (106 aa)
CINS_1473Hypothetical protein (DUF814 domain), putative fibronectin/fibrinogen binding protein; Pfam matches to PF05670.8 DUF814, and to PF05833.6 FbpA, and to PF05833.6 FbpA. (434 aa)
CINS_1497SAM-dependent methyltransferase; Pfam match to PF13489.1 Methyltransf_23. (225 aa)
Your Current Organism:
Campylobacter insulaenigrae
NCBI taxonomy Id: 1031564
Other names: C. insulaenigrae NCTC 12927, Campylobacter insulaenigrae DSM 17739, Campylobacter insulaenigrae LMG 22716, Campylobacter insulaenigrae NCTC 12927, Campylobacter insulaenigrae str. NCTC 12927, Campylobacter insulaenigrae strain NCTC 12927
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