STRINGSTRING
pseI pseI galU galU CINS_0288 CINS_0288 fcl fcl glmU glmU CINS_1035 CINS_1035 neuC neuC neuB neuB gne gne pglF pglF pseB pseB pseC pseC pseF pseF pseG pseG pseH pseH
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pseIPseudaminic acid synthase; Pfam matches to PF03102.9 NeuB, and to PF08666.7 SAF. (345 aa)
galUUTP--glucose-1-phosphate uridylyltransferase; Pfam match to PF00483.18 NTP_transferase. (274 aa)
CINS_0288dTDP-4-dehydrorhamnose 3,5-epimerase; Pfam match to PF00908.12 dTDP_sugar_isom. (180 aa)
fclGDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (345 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (430 aa)
CINS_1035Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.12 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family. (360 aa)
neuCUDP-N-acetylglucosamine 2-epimerase; Pfam match to PF02350.14 Epimerase_2. (374 aa)
neuBSialic acid synthase (N-acetylneuraminic acid synthetase); Pfam matches to PF03102.9 NeuB, and to PF08666.7 SAF. (341 aa)
gneUDP-GlcNAc/Glc 4-epimerase; Pfam matches to PF01370.16 Epimerase, and to PF13950.1 Epimerase_Csub; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)
pglFUDP-N-acetylglucosamine C-6 dehydratase; Pfam matches to PF02719.10 Polysacc_synt_2, and to PF13727.1 CoA_binding_3. (587 aa)
pseBUDP-N-acetylglucosamine 4,6-dehydratase; Pfam match to PF02719.10 Polysacc_synt_2. (335 aa)
pseCUDP-2-acetamido-2, 6-dideoxy-beta-L-arabino-hex-4-ulose aminotransferase; Pfam match to PF01041.12 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family. (375 aa)
pseFCMP-pseudaminic acid synthetase; Pfam match to PF02348.14 CTP_transf_3. (233 aa)
pseGUDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase. (274 aa)
pseHUDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase; Pfam match to PF13420.1 Acetyltransf_4. (155 aa)
Your Current Organism:
Campylobacter insulaenigrae
NCBI taxonomy Id: 1031564
Other names: C. insulaenigrae NCTC 12927, Campylobacter insulaenigrae DSM 17739, Campylobacter insulaenigrae LMG 22716, Campylobacter insulaenigrae NCTC 12927, Campylobacter insulaenigrae str. NCTC 12927, Campylobacter insulaenigrae strain NCTC 12927
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