30 items (Aspergillus kawachii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKAW_01496	MAP kinase kinase. (538 aa)
	AKAW_01826	Amidohydrolase. (446 aa)
	AKAW_09841	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (247 aa)
	AKAW_03848	RacA. (257 aa)
	AKAW_11125	Dihydropyrimidinase. (500 aa)
	AKAW_10577	Zn(II)2Cys6 transcription factor. (637 aa)
	AKAW_10416	Zn(II)2Cys6 transcription factor. (631 aa)
	AKAW_03797	MAP kinase kinase Ste7. (533 aa)
	AKAW_04226	Uncharacterized protein. (108 aa)
	AKAW_04755	Amidohydrolase. (444 aa)
	AKAW_05335	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (937 aa)
	AKAW_05337	Homeobox transcription factor. (581 aa)
	AKAW_05083	Allantoinase. (503 aa)
	AKAW_05470	Dual specificity mitogen-activated protein kinase kinase dSOR1. (646 aa)
	AKAW_05562	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	AKAW_05795	Uncharacterized protein. (664 aa)
	AKAW_05885	Cofilin, actophorin; Belongs to the actin-binding proteins ADF family. (150 aa)
	AKAW_06060	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (354 aa)
	AKAW_06653	Allantoinase. (490 aa)
	AKAW_08484	Amidohydrolase. (429 aa)
	AKAW_08896	Cofilin; Belongs to the actin-binding proteins ADF family. (155 aa)
	AKAW_08909	Similar to An14g03950. (252 aa)
	AKAW_09425	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (441 aa)
	AKAW_09710	Endo-polygalacturonase D (PgaD). (496 aa)
	AKAW_00434	Similar to An02g03650. (232 aa)
	AKAW_00595	Allergenic cerato-platanin Asp F13. (149 aa)
	AKAW_00803	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1679 aa)
	SLX4	Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (818 aa)
	AKAW_02987	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (751 aa)
	AKAW_03152	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (714 aa)

Your Current Organism:

Aspergillus kawachii

NCBI taxonomy Id: 1033177
Other names: A. kawachii IFO 4308, Aspergillus kawachii IFO 4308

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAW_00434	AKAW_03848	G7X5G1	G7XFC0	Similar to An02g03650.	RacA.	0.668
AKAW_00803	AKAW_02987	G7X6S8	G7XDM2	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.906
AKAW_00803	AKAW_03152	G7X6S8	G7XCU6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.906
AKAW_00803	AKAW_03848	G7X6S8	G7XFC0	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	RacA.	0.743
AKAW_00803	AKAW_05335	G7X6S8	G7XJK6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.864
AKAW_00803	AKAW_05562	G7X6S8	G7XKF0	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.878
AKAW_00803	AKAW_05795	G7X6S8	G7XL73	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.790
AKAW_00803	AKAW_06060	G7X6S8	G7XLY7	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.540
AKAW_00803	AKAW_08909	G7X6S8	G7XV00	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Similar to An14g03950.	0.906
AKAW_00803	AKAW_09425	G7X6S8	G7XWK2	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.908
AKAW_00803	AKAW_09710	G7X6S8	G7XXD7	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Endo-polygalacturonase D (PgaD).	0.736
AKAW_00803	AKAW_09841	G7X6S8	G7XXM9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.990
AKAW_01496	AKAW_03797	G7X8Z8	G7XFF6	MAP kinase kinase.	MAP kinase kinase Ste7.	0.689
AKAW_01496	AKAW_03848	G7X8Z8	G7XFC0	MAP kinase kinase.	RacA.	0.579
AKAW_01496	AKAW_05470	G7X8Z8	G7XK58	MAP kinase kinase.	Dual specificity mitogen-activated protein kinase kinase dSOR1.	0.528
AKAW_01496	AKAW_06060	G7X8Z8	G7XLY7	MAP kinase kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.832
AKAW_02987	AKAW_00803	G7XDM2	G7X6S8	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.906
AKAW_02987	AKAW_03848	G7XDM2	G7XFC0	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	RacA.	0.538
AKAW_02987	AKAW_04226	G7XDM2	G7XGQ3	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Uncharacterized protein.	0.906
AKAW_02987	AKAW_05335	G7XDM2	G7XJK6	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.912