STRINGSTRING
CCB69787.1 CCB69787.1 truA truA icmF icmF CCB70127.1 CCB70127.1 CCB70637.1 CCB70637.1 truB truB purE purE gpmI gpmI mutB mutB mutA mutA CCB68918.1 CCB68918.1 menF menF CCB69461.1 CCB69461.1 CCB69602.1 CCB69602.1 hemL hemL CCB70388.1 CCB70388.1 CCB70445.1 CCB70445.1 CCB70456.1 CCB70456.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCB69787.1Probable 23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (346 aa)
truAtRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (248 aa)
icmFMethylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1147 aa)
CCB70127.1Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (190 aa)
CCB70637.1Putative phospho-2-dehydro-3-deoxyheptonate aldolase. (360 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (225 aa)
purEPhosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (159 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (505 aa)
mutBMethylmalonyl-CoA mutase large subunit. (708 aa)
mutAMethylmalonyl-CoA mutase small subunit. (454 aa)
CCB68918.1Phosphoglucomutase/phosphomannomutase family protein. (462 aa)
menFIsochorismate synthase. (353 aa)
CCB69461.1Protein of unknown function precursor. (212 aa)
CCB69602.1Probable 23S rRNA pseudouridine synthase. (232 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (428 aa)
CCB70388.1Pseudouridylate synthase. (301 aa)
CCB70445.1Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (248 aa)
CCB70456.1Phosphoglucomutase/phosphomannomutase family protein. (574 aa)
Your Current Organism:
Flavobacterium branchiophilum
NCBI taxonomy Id: 1034807
Other names: F. branchiophilum FL-15, Flavobacterium branchiophilum FL-15, Flavobacterium branchiophilum str. FL-15, Flavobacterium branchiophilum strain FL-15
Server load: low (30%) [HD]