STRINGSTRING
metZ metZ aspC4 aspC4 ltaE ltaE CCB69264.1 CCB69264.1 gcvP gcvP argD argD CCB68946.1 CCB68946.1 rfbH rfbH kynU kynU porR porR bioF bioF CCB68330.1 CCB68330.1 aspC1 aspC1 CCB69485.1 CCB69485.1 serC serC rocD rocD CCB69647.1 CCB69647.1 hisC hisC CCB69733.1 CCB69733.1 aspC2 aspC2 glyA glyA CCB70096.1 CCB70096.1 CCB70105.1 CCB70105.1 hemL hemL aspC3 aspC3 bioA bioA sufS sufS CCB69150.1 CCB69150.1 metY metY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (393 aa)
aspC4Probable aspartate transaminase AspC4. (386 aa)
ltaEThreonine aldolase. (339 aa)
CCB69264.1Aminocarboxylic acid CoA-ligase. (419 aa)
gcvPGlycine dehydrogenase (decarboxylating); Belongs to the GcvP family. (947 aa)
argDAcetylornithine/succinyldiaminopimelatetransamin ase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (396 aa)
CCB68946.1Probable cysteine desulfurase. (377 aa)
rfbHLipopolysaccharide biosynthesis protein RfbH; Belongs to the DegT/DnrJ/EryC1 family. (434 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (426 aa)
porRPorR protein, probably involved in biosynthesis of cell surface polysaccharide; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
bioF8-amino-7-oxononanoate synthase; Biotin metabolism. (378 aa)
CCB68330.1Cys/Met metabolism PLP-dependent enzyme. (380 aa)
aspC1Probable aspartate transaminase AspC1. (396 aa)
CCB69485.1Putative aminotransferase. (496 aa)
serCPhosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (361 aa)
rocDOrnithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (414 aa)
CCB69647.1Probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (382 aa)
hisCHistidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (349 aa)
CCB69733.1Probable aminotransferase involved in lipopolysaccharide biosynthesis; Belongs to the DegT/DnrJ/EryC1 family. (363 aa)
aspC2Probable aspartate transaminase AspC2. (397 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (424 aa)
CCB70096.1Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (376 aa)
CCB70105.1Aminotransferase, class V. (384 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (428 aa)
aspC3Probable aspartate transaminase AspC3. (381 aa)
bioAAdenosylmethionine--8-amino-7- oxononanoatetransaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa)
sufSCysteine desulfurase, SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (404 aa)
CCB69150.1Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
metYProbable O-acetylhomoserine aminocarboxypropyltransferase. (421 aa)
Your Current Organism:
Flavobacterium branchiophilum
NCBI taxonomy Id: 1034807
Other names: F. branchiophilum FL-15, Flavobacterium branchiophilum FL-15, Flavobacterium branchiophilum str. FL-15, Flavobacterium branchiophilum strain FL-15
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