STRINGSTRING
CCB68330.1 CCB68330.1 aspC4 aspC4 trxB1 trxB1 CCB70605.1 CCB70605.1 CCB70607.1 CCB70607.1 trxB2 trxB2 cysN cysN cysD cysD sufS sufS metG metG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCB68330.1Cys/Met metabolism PLP-dependent enzyme. (380 aa)
aspC4Probable aspartate transaminase AspC4. (386 aa)
trxB1Thioredoxin-disulfide reductase. (313 aa)
CCB70605.1Methionine synthase, homocysteine S-methyltransferase domain. (325 aa)
CCB70607.1Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1063 aa)
trxB2Thioredoxin-disulfide reductase. (350 aa)
cysNSulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (414 aa)
cysDSulfate adenylyltransferase subunit 2; Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3. (299 aa)
sufSCysteine desulfurase, SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (404 aa)
metGMethionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (705 aa)
Your Current Organism:
Flavobacterium branchiophilum
NCBI taxonomy Id: 1034807
Other names: F. branchiophilum FL-15, Flavobacterium branchiophilum FL-15, Flavobacterium branchiophilum str. FL-15, Flavobacterium branchiophilum strain FL-15
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