STRINGSTRING
CEG07401.1 CEG07401.1 lpxD lpxD lpxA lpxA lpxB lpxB kdsA kdsA CEG07986.1 CEG07986.1 CEG08124.1 CEG08124.1 arnT arnT CEG08128.1 CEG08128.1 CEG08354.1 CEG08354.1 CEG08355.1 CEG08355.1 CEG08919.1 CEG08919.1 kdsB kdsB spsA spsA rfaG rfaG lpxK lpxK CEG09354.1 CEG09354.1 ubiB ubiB kdsD kdsD rfaF_1 rfaF_1 lpxC lpxC CEG07338.1 CEG07338.1 epsM epsM gmhB gmhB rfaC rfaC rfaF_2 rfaF_2 hldD hldD hldE hldE CEG07368.1 CEG07368.1 CEG07817.1 CEG07817.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEG07401.1Hypothetical protein. (354 aa)
lpxDUDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (362 aa)
lpxAAcyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (267 aa)
lpxBLipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (392 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. (283 aa)
CEG07986.1Retron-type reverse transcriptase. (410 aa)
CEG08124.1lipid-A-disaccharide synthase. (112 aa)
arnTUndecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase. (580 aa)
CEG08128.1Aspartyl/Asparaginyl beta-hydroxylase. (269 aa)
CEG08354.1Lipid A biosynthesis lauroyl acyltransferase. (230 aa)
CEG08355.1Lipid A biosynthesis lauroyl acyltransferase. (61 aa)
CEG08919.1Transferase 2, rSAM/selenodomain-associated. (190 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (247 aa)
spsASpore coat polysaccharide biosynthesis protein SpsA. (416 aa)
rfaGLipopolysaccharide core biosynthesis protein RfaG. (384 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (270 aa)
CEG09354.1Hypothetical protein. (224 aa)
ubiBAminoglycoside acetyltransferase regulator; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. (522 aa)
kdsDArabinose 5-phosphate isomerase KdsD; Belongs to the SIS family. GutQ/KpsF subfamily. (336 aa)
rfaF_1ADP-heptose--LPS heptosyltransferase 2. (336 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (322 aa)
CEG07338.1Hypothetical protein. (291 aa)
epsMPutative acetyltransferase EpsM. (207 aa)
gmhBD,D-heptose 1,7-bisphosphate phosphatase. (140 aa)
rfaCLipopolysaccharide heptosyltransferase 1. (319 aa)
rfaF_2ADP-heptose--LPS heptosyltransferase 2. (359 aa)
hldDADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (326 aa)
hldEBifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (137 aa)
CEG07368.1UDP-2,3-diacylglucosamine hydrolase. (270 aa)
CEG07817.1Putative bicarbonate transporter, IctB family. (422 aa)
Your Current Organism:
Afipia felis
NCBI taxonomy Id: 1035
Other names: A. felis, AFIP strain BV, ATCC 53690, CCUG 30456, CIP 103515, DSM 7326, LMG 18884, LMG:18884, NCTC 12499, cat scratch disease bacillus, strain B-91-007352
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