(21 nodes) Cytosolic small ribosomal subunit, and Ribosomal protein S13 network (Aspergillus versicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9P4Y1	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
	A0A1L9P6G1	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	A0A1L9P807	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	A0A1L9PAC8	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (295 aa)
	A0A1L9PG00	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
	A0A1L9PGF1	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	A0A1L9PGL4	40S ribosomal protein S27. (82 aa)
	A0A1L9PI31	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (179 aa)
	A0A1L9PIB9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	A0A1L9PID3	Uncharacterized protein. (139 aa)
	A0A1L9PM46	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	A0A1L9PMA9	S10_plectin domain-containing protein. (186 aa)
	A0A1L9PMK2	Uncharacterized protein. (433 aa)
	A0A1L9PN17	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (113 aa)
	A0A1L9PRP8	Uncharacterized protein. (148 aa)
	A0A1L9PTL4	Uncharacterized protein. (68 aa)
	A0A1L9PTR5	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	A0A1L9PZS9	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (168 aa)
	A0A1L9Q4H7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9P4Y1	A0A1L9P6G1	A0A1L9P4Y1	A0A1L9P6G1	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.999
A0A1L9P4Y1	A0A1L9P807	A0A1L9P4Y1	A0A1L9P807	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A1L9P4Y1	A0A1L9PAC8	A0A1L9P4Y1	A0A1L9PAC8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
A0A1L9P4Y1	A0A1L9PG00	A0A1L9P4Y1	A0A1L9PG00	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
A0A1L9P4Y1	A0A1L9PGF1	A0A1L9P4Y1	A0A1L9PGF1	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
A0A1L9P4Y1	A0A1L9PGL4	A0A1L9P4Y1	A0A1L9PGL4	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S27.	0.999
A0A1L9P4Y1	A0A1L9PI31	A0A1L9P4Y1	A0A1L9PI31	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A1L9P4Y1	A0A1L9PIB9	A0A1L9P4Y1	A0A1L9PIB9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A1L9P4Y1	A0A1L9PID3	A0A1L9P4Y1	A0A1L9PID3	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
A0A1L9P4Y1	A0A1L9PM46	A0A1L9P4Y1	A0A1L9PM46	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.999
A0A1L9P4Y1	A0A1L9PMA9	A0A1L9P4Y1	A0A1L9PMA9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	S10_plectin domain-containing protein.	0.999
A0A1L9P4Y1	A0A1L9PMK2	A0A1L9P4Y1	A0A1L9PMK2	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
A0A1L9P4Y1	A0A1L9PN17	A0A1L9P4Y1	A0A1L9PN17	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A1L9P4Y1	A0A1L9PRP8	A0A1L9P4Y1	A0A1L9PRP8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
A0A1L9P4Y1	A0A1L9PTL4	A0A1L9P4Y1	A0A1L9PTL4	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
A0A1L9P4Y1	A0A1L9PTR5	A0A1L9P4Y1	A0A1L9PTR5	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A1L9P4Y1	A0A1L9PZS9	A0A1L9P4Y1	A0A1L9PZS9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
A0A1L9P4Y1	A0A1L9Q4H7	A0A1L9P4Y1	A0A1L9Q4H7	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
A0A1L9P4Y1	RPS0	A0A1L9P4Y1	A0A1L9PEN1	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
A0A1L9P4Y1	RPS1	A0A1L9P4Y1	A0A1L9PZD4	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999