12 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PVV2	Uncharacterized protein. (499 aa)
	A0A1L9PHJ6	TBPIP domain-containing protein. (203 aa)
	A0A1L9PI09	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (443 aa)
	A0A1L9PGN1	H15 domain-containing protein. (185 aa)
	A0A1L9PB53	RING-type domain-containing protein. (368 aa)
	A0A1L9P7P9	Ubiquitin-like domain-containing protein. (92 aa)
	A0A1L9PSU1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (603 aa)
	A0A1L9PSP1	Uncharacterized protein. (591 aa)
	A0A1L9PME4	HORMA domain-containing protein. (753 aa)
	A0A1L9PJN5	Structural maintenance of chromosomes protein. (1199 aa)
	A0A1L9PT71	Checkpoint protein; Belongs to the HUS1 family. (369 aa)
	A0A1L9PTJ1	Uncharacterized protein. (662 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P7P9	A0A1L9PGN1	Ubiquitin-like domain-containing protein.	H15 domain-containing protein.	0.404
A0A1L9P7P9	A0A1L9PJN5	Ubiquitin-like domain-containing protein.	Structural maintenance of chromosomes protein.	0.845
A0A1L9P7P9	A0A1L9PSP1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.718
A0A1L9P7P9	A0A1L9PSU1	Ubiquitin-like domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.759
A0A1L9P7P9	A0A1L9PTJ1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.677
A0A1L9PGN1	A0A1L9P7P9	H15 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.404
A0A1L9PHJ6	A0A1L9PME4	TBPIP domain-containing protein.	HORMA domain-containing protein.	0.447
A0A1L9PI09	A0A1L9PJN5	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Structural maintenance of chromosomes protein.	0.401
A0A1L9PI09	A0A1L9PSU1	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.962
A0A1L9PI09	A0A1L9PT71	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Checkpoint protein; Belongs to the HUS1 family.	0.999
A0A1L9PI09	A0A1L9PVV2	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Uncharacterized protein.	0.999
A0A1L9PJN5	A0A1L9P7P9	Structural maintenance of chromosomes protein.	Ubiquitin-like domain-containing protein.	0.845
A0A1L9PJN5	A0A1L9PI09	Structural maintenance of chromosomes protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.401
A0A1L9PJN5	A0A1L9PME4	Structural maintenance of chromosomes protein.	HORMA domain-containing protein.	0.630
A0A1L9PJN5	A0A1L9PSP1	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.999
A0A1L9PJN5	A0A1L9PSU1	Structural maintenance of chromosomes protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.489
A0A1L9PJN5	A0A1L9PTJ1	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.995
A0A1L9PME4	A0A1L9PHJ6	HORMA domain-containing protein.	TBPIP domain-containing protein.	0.447
A0A1L9PME4	A0A1L9PJN5	HORMA domain-containing protein.	Structural maintenance of chromosomes protein.	0.630
A0A1L9PME4	A0A1L9PSP1	HORMA domain-containing protein.	Uncharacterized protein.	0.563