STRINGSTRING
LSM1 LSM1 A0A1L9Q2V9 A0A1L9Q2V9 A0A1L9Q2V2 A0A1L9Q2V2 A0A1L9PZW9 A0A1L9PZW9 A0A1L9PZ80 A0A1L9PZ80 A0A1L9PXT6 A0A1L9PXT6 A0A1L9PX68 A0A1L9PX68 A0A1L9PX67 A0A1L9PX67 A0A1L9PVW8 A0A1L9PVW8 A0A1L9PVS1 A0A1L9PVS1 A0A1L9PVA9 A0A1L9PVA9 A0A1L9PU49 A0A1L9PU49 A0A1L9PTU5 A0A1L9PTU5 A0A1L9PT36 A0A1L9PT36 A0A1L9PT33 A0A1L9PT33 A0A1L9PSW8 A0A1L9PSW8 A0A1L9PSU8 A0A1L9PSU8 A0A1L9PSU5 A0A1L9PSU5 A0A1L9PSN3 A0A1L9PSN3 A0A1L9PSK0 A0A1L9PSK0 A0A1L9PS59 A0A1L9PS59 A0A1L9PS02 A0A1L9PS02 A0A1L9PR73 A0A1L9PR73 A0A1L9PPZ6 A0A1L9PPZ6 A0A1L9PPY0 A0A1L9PPY0 A0A1L9PPD1 A0A1L9PPD1 A0A1L9PP67 A0A1L9PP67 A0A1L9PNY5 A0A1L9PNY5 A0A1L9PNY4 A0A1L9PNY4 LSM5 LSM5 A0A1L9PLX3 A0A1L9PLX3 A0A1L9PLQ4 A0A1L9PLQ4 A0A1L9PLC3 A0A1L9PLC3 A0A1L9PL18 A0A1L9PL18 A0A1L9PKV4 A0A1L9PKV4 A0A1L9PJL3 A0A1L9PJL3 A0A1L9PJ86 A0A1L9PJ86 LSM4 LSM4 A0A1L9PJ20 A0A1L9PJ20 A0A1L9PJ02 A0A1L9PJ02 A0A1L9PIP6 A0A1L9PIP6 A0A1L9PIG1 A0A1L9PIG1 A0A1L9PI66 A0A1L9PI66 A0A1L9PHH0 A0A1L9PHH0 A0A1L9PHF9 A0A1L9PHF9 A0A1L9PHE2 A0A1L9PHE2 A0A1L9PHB2 A0A1L9PHB2 A0A1L9PGI9 A0A1L9PGI9 A0A1L9PFS1 A0A1L9PFS1 A0A1L9PFL2 A0A1L9PFL2 A0A1L9PF54 A0A1L9PF54 A0A1L9PB29 A0A1L9PB29 A0A1L9PAX7 A0A1L9PAX7 A0A1L9PAT8 A0A1L9PAT8 PAN2 PAN2 A0A1L9PAE6 A0A1L9PAE6 A0A1L9PAA7 A0A1L9PAA7 A0A1L9P9K3 A0A1L9P9K3 A0A1L9P901 A0A1L9P901 A0A1L9P8V1 A0A1L9P8V1 A0A1L9P8R9 A0A1L9P8R9 A0A1L9P8D3 A0A1L9P8D3 A0A1L9P740 A0A1L9P740 A0A1L9P6C3 A0A1L9P6C3 A0A1L9P5Y8 A0A1L9P5Y8 PAN3 PAN3 A0A1L9P5A0 A0A1L9P5A0 A0A1L9P4R6 A0A1L9P4R6 A0A1L9P436 A0A1L9P436 A0A1L9P3B5 A0A1L9P3B5 A0A1L9P341 A0A1L9P341
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (173 aa)
A0A1L9Q2V9RNase III domain-containing protein. (352 aa)
A0A1L9Q2V2PUM-HD domain-containing protein. (858 aa)
A0A1L9PZW9Uncharacterized protein. (1157 aa)
A0A1L9PZ80Uncharacterized protein. (271 aa)
A0A1L9PXT6Uncharacterized protein. (1458 aa)
A0A1L9PX68Uncharacterized protein. (604 aa)
A0A1L9PX67Histone H2A; Belongs to the histone H2A family. (137 aa)
A0A1L9PVW8Uncharacterized protein; Belongs to the RNR ribonuclease family. (1030 aa)
A0A1L9PVS1Endo/exonuclease/phosphatase domain-containing protein. (677 aa)
A0A1L9PVA9Uncharacterized protein. (577 aa)
A0A1L9PU49RNase_PH domain-containing protein. (413 aa)
A0A1L9PTU5Uncharacterized protein. (883 aa)
A0A1L9PT36Uncharacterized protein. (831 aa)
A0A1L9PT33PUM-HD domain-containing protein. (871 aa)
A0A1L9PSW8RAI1 domain-containing protein. (357 aa)
A0A1L9PSU8RRM_2 domain-containing protein. (670 aa)
A0A1L9PSU5Uncharacterized protein. (206 aa)
A0A1L9PSN3Uncharacterized protein. (1632 aa)
A0A1L9PSK0Uncharacterized protein. (335 aa)
A0A1L9PS59Uncharacterized protein. (491 aa)
A0A1L9PS02Uncharacterized protein. (249 aa)
A0A1L9PR73Uncharacterized protein. (239 aa)
A0A1L9PPZ6Uncharacterized protein. (619 aa)
A0A1L9PPY0Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (404 aa)
A0A1L9PPD1Uncharacterized protein. (273 aa)
A0A1L9PP67Uncharacterized protein. (283 aa)
A0A1L9PNY5PAT1 domain-containing protein. (826 aa)
A0A1L9PNY4zf-C3H1 domain-containing protein. (1215 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A1L9PLX3Uncharacterized protein. (488 aa)
A0A1L9PLQ4RNase_PH domain-containing protein. (265 aa)
A0A1L9PLC3Mago-bind domain-containing protein. (219 aa)
A0A1L9PL18EST1_DNA_bind domain-containing protein. (748 aa)
A0A1L9PKV4Uncharacterized protein. (324 aa)
A0A1L9PJL3RING-type domain-containing protein. (957 aa)
A0A1L9PJ86RNase_PH domain-containing protein. (395 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
A0A1L9PJ20Nuclear cap-binding protein subunit 2. (177 aa)
A0A1L9PJ02Uncharacterized protein. (252 aa)
A0A1L9PIP6Uncharacterized protein. (295 aa)
A0A1L9PIG1Uncharacterized protein. (1291 aa)
A0A1L9PI66Uncharacterized protein; Belongs to the DEAD box helicase family. (463 aa)
A0A1L9PHH0ECR1_N domain-containing protein. (721 aa)
A0A1L9PHF9Uncharacterized protein. (198 aa)
A0A1L9PHE2Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (245 aa)
A0A1L9PHB2Uncharacterized protein. (424 aa)
A0A1L9PGI9Uncharacterized protein. (242 aa)
A0A1L9PFS1Uncharacterized protein. (2325 aa)
A0A1L9PFL2HRDC domain-containing protein. (770 aa)
A0A1L9PF54Uncharacterized protein. (1415 aa)
A0A1L9PB29Uncharacterized protein. (199 aa)
A0A1L9PAX7Tr-type G domain-containing protein. (708 aa)
A0A1L9PAT8Tr-type G domain-containing protein. (822 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1157 aa)
A0A1L9PAE6CCHC-type domain-containing protein. (676 aa)
A0A1L9PAA7Uncharacterized protein. (549 aa)
A0A1L9P9K3RING-type domain-containing protein. (1470 aa)
A0A1L9P901Uncharacterized protein. (242 aa)
A0A1L9P8V1Uncharacterized protein. (169 aa)
A0A1L9P8R9Uncharacterized protein. (452 aa)
A0A1L9P8D3WD_REPEATS_REGION domain-containing protein. (305 aa)
A0A1L9P740Uncharacterized protein. (476 aa)
A0A1L9P6C3Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (594 aa)
A0A1L9P5Y8Sm domain-containing protein. (132 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (661 aa)
A0A1L9P5A0RRM domain-containing protein. (577 aa)
A0A1L9P4R6SAM domain-containing protein. (619 aa)
A0A1L9P436RRM domain-containing protein. (422 aa)
A0A1L9P3B5Nudix hydrolase domain-containing protein. (1226 aa)
A0A1L9P341Uncharacterized protein. (251 aa)
Your Current Organism:
Aspergillus versicolor
NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65
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