21 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PSB5	Sm domain-containing protein. (86 aa)
	A0A1L9PSY6	RRM domain-containing protein. (113 aa)
	A0A1L9PT37	Uncharacterized protein. (355 aa)
	A0A1L9PY29	PSP domain-containing protein. (553 aa)
	A0A1L9PZG2	Uncharacterized protein. (148 aa)
	A0A1L9Q013	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A0A1L9PRB6	Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
	A0A1L9PQA6	Sm domain-containing protein. (216 aa)
	A0A1L9PP17	RRM domain-containing protein. (281 aa)
	A0A1L9PNP2	Uncharacterized protein. (97 aa)
	A0A1L9PMB6	Matrin-type domain-containing protein. (237 aa)
	A0A1L9PM93	CPSF_A domain-containing protein. (1209 aa)
	A0A1L9PGN4	Uncharacterized protein. (531 aa)
	A0A1L9PFW1	CID domain-containing protein. (813 aa)
	A0A1L9PD06	Uncharacterized protein. (108 aa)
	A0A1L9PBB6	SF3b1 domain-containing protein. (1228 aa)
	A0A1L9P9S1	Small nuclear ribonucleoprotein Sm D2. (115 aa)
	A0A1L9P8H2	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9P7E1	RRM domain-containing protein. (421 aa)
	A0A1L9P4R9	Uncharacterized protein. (839 aa)
	A0A1L9P3W4	Uncharacterized protein. (252 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P3W4	A0A1L9P7E1	Uncharacterized protein.	RRM domain-containing protein.	0.936
A0A1L9P3W4	A0A1L9P8H2	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.995
A0A1L9P3W4	A0A1L9P9S1	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.995
A0A1L9P3W4	A0A1L9PBB6	Uncharacterized protein.	SF3b1 domain-containing protein.	0.994
A0A1L9P3W4	A0A1L9PD06	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1L9P3W4	A0A1L9PFW1	Uncharacterized protein.	CID domain-containing protein.	0.985
A0A1L9P3W4	A0A1L9PGN4	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A1L9P3W4	A0A1L9PM93	Uncharacterized protein.	CPSF_A domain-containing protein.	0.995
A0A1L9P3W4	A0A1L9PMB6	Uncharacterized protein.	Matrin-type domain-containing protein.	0.993
A0A1L9P3W4	A0A1L9PNP2	Uncharacterized protein.	Uncharacterized protein.	0.980
A0A1L9P3W4	A0A1L9PP17	Uncharacterized protein.	RRM domain-containing protein.	0.949
A0A1L9P3W4	A0A1L9PQA6	Uncharacterized protein.	Sm domain-containing protein.	0.994
A0A1L9P3W4	A0A1L9PRB6	Uncharacterized protein.	Splicing factor subunit; Belongs to the SF3B5 family.	0.990
A0A1L9P3W4	A0A1L9PSB5	Uncharacterized protein.	Sm domain-containing protein.	0.994
A0A1L9P3W4	A0A1L9PSY6	Uncharacterized protein.	RRM domain-containing protein.	0.970
A0A1L9P3W4	A0A1L9PT37	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A1L9P3W4	A0A1L9PY29	Uncharacterized protein.	PSP domain-containing protein.	0.993
A0A1L9P3W4	A0A1L9PZG2	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A1L9P3W4	A0A1L9Q013	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
A0A1L9P7E1	A0A1L9P3W4	RRM domain-containing protein.	Uncharacterized protein.	0.936