10 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PUV4	Uncharacterized protein. (255 aa)
	A0A1L9PQM5	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (227 aa)
	A0A1L9PNH6	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (213 aa)
	A0A1L9PI38	Pyr_redox_2 domain-containing protein. (440 aa)
	A0A1L9PCT7	Uncharacterized protein. (421 aa)
	A0A1L9PB77	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)
	A0A1L9PB58	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family. (475 aa)
	A0A1L9P6E5	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (167 aa)
	A0A1L9Q0P0	Pyr_redox_2 domain-containing protein. (443 aa)
	A0A1L9PXX5	Polyketide_cyc domain-containing protein. (254 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P6E5	A0A1L9PB58	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.887
A0A1L9P6E5	A0A1L9PCT7	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	Uncharacterized protein.	0.604
A0A1L9P6E5	A0A1L9PNH6	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.682
A0A1L9P6E5	A0A1L9PQM5	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.682
A0A1L9PB58	A0A1L9P6E5	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.887
A0A1L9PB58	A0A1L9PCT7	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	Uncharacterized protein.	0.992
A0A1L9PB58	A0A1L9PNH6	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.999
A0A1L9PB58	A0A1L9PQM5	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.999
A0A1L9PCT7	A0A1L9P6E5	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.604
A0A1L9PCT7	A0A1L9PB58	Uncharacterized protein.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.992
A0A1L9PNH6	A0A1L9P6E5	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.682
A0A1L9PNH6	A0A1L9PB58	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.999
A0A1L9PNH6	A0A1L9PQM5	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.881
A0A1L9PQM5	A0A1L9P6E5	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.682
A0A1L9PQM5	A0A1L9PB58	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.999
A0A1L9PQM5	A0A1L9PNH6	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.881