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LSM3 LSM3 A0A1L9P5Y8 A0A1L9P5Y8 LSM8 LSM8 A0A1L9P8H2 A0A1L9P8H2 A0A1L9P9S1 A0A1L9P9S1 A0A1L9PAR2 A0A1L9PAR2 A0A1L9PAT9 A0A1L9PAT9 LSM4 LSM4 LSM1 LSM1 A0A1L9PLN3 A0A1L9PLN3 LSM5 LSM5 A0A1L9PN79 A0A1L9PN79 A0A1L9PQA6 A0A1L9PQA6 A0A1L9PSB5 A0A1L9PSB5 A0A1L9PSE5 A0A1L9PSE5 A0A1L9Q013 A0A1L9Q013
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A1L9P5Y8Sm domain-containing protein. (132 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A1L9P8H2Small nuclear ribonucleoprotein G. (78 aa)
A0A1L9P9S1Small nuclear ribonucleoprotein Sm D2. (115 aa)
A0A1L9PAR2Small nuclear ribonucleoprotein Sm D3. (116 aa)
A0A1L9PAT9Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (173 aa)
A0A1L9PLN3Sm domain-containing protein. (109 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A1L9PN79Sm domain-containing protein. (80 aa)
A0A1L9PQA6Sm domain-containing protein. (216 aa)
A0A1L9PSB5Sm domain-containing protein. (86 aa)
A0A1L9PSE5Sm domain-containing protein. (2423 aa)
A0A1L9Q013Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
Your Current Organism:
Aspergillus versicolor
NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65
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