20 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

gene neighborhood

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Your Input:
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
	A0A1L9PLN3	Sm domain-containing protein. (109 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
	A0A1L9PIM8	Mechanosensitive ion channel protein. (923 aa)
	A0A1L9PAT9	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
	A0A1L9PAR2	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	A0A1L9P5Y8	Sm domain-containing protein. (132 aa)
	A0A1L9P6X6	Uncharacterized protein. (566 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (173 aa)
	A0A1L9Q2F4	Mechanosensitive ion channel protein. (886 aa)
	A0A1L9Q013	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A0A1L9PSF4	Mechanosensitive ion channel protein. (936 aa)
	A0A1L9PSE5	Sm domain-containing protein. (2423 aa)
	A0A1L9PSB5	Sm domain-containing protein. (86 aa)
	A0A1L9PQA6	Sm domain-containing protein. (216 aa)
	A0A1L9PN79	Sm domain-containing protein. (80 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A1L9P8H2	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9P9S1	Small nuclear ribonucleoprotein Sm D2. (115 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9P5Y8	A0A1L9P8H2	A0A1L9P5Y8	A0A1L9P8H2	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.980
A0A1L9P5Y8	A0A1L9P9S1	A0A1L9P5Y8	A0A1L9P9S1	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.994
A0A1L9P5Y8	A0A1L9PAR2	A0A1L9P5Y8	A0A1L9PAR2	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.979
A0A1L9P5Y8	A0A1L9PAT9	A0A1L9P5Y8	A0A1L9PAT9	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.980
A0A1L9P5Y8	A0A1L9PLN3	A0A1L9P5Y8	A0A1L9PLN3	Sm domain-containing protein.	Sm domain-containing protein.	0.912
A0A1L9P5Y8	A0A1L9PN79	A0A1L9P5Y8	A0A1L9PN79	Sm domain-containing protein.	Sm domain-containing protein.	0.999
A0A1L9P5Y8	A0A1L9PQA6	A0A1L9P5Y8	A0A1L9PQA6	Sm domain-containing protein.	Sm domain-containing protein.	0.966
A0A1L9P5Y8	A0A1L9PSB5	A0A1L9P5Y8	A0A1L9PSB5	Sm domain-containing protein.	Sm domain-containing protein.	0.981
A0A1L9P5Y8	A0A1L9Q013	A0A1L9P5Y8	A0A1L9Q013	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.979
A0A1L9P5Y8	LSM1	A0A1L9P5Y8	A0A1L9PJ71	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.979
A0A1L9P5Y8	LSM3	A0A1L9P5Y8	A0A1L9P3P0	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A1L9P5Y8	LSM4	A0A1L9P5Y8	A0A1L9PJ26	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A1L9P5Y8	LSM5	A0A1L9P5Y8	A0A1L9PMW3	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A1L9P5Y8	LSM8	A0A1L9P5Y8	A0A1L9P786	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
A0A1L9P6X6	LSM1	A0A1L9P6X6	A0A1L9PJ71	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.572
A0A1L9P6X6	LSM3	A0A1L9P6X6	A0A1L9P3P0	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.513
A0A1L9P6X6	LSM4	A0A1L9P6X6	A0A1L9PJ26	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.530
A0A1L9P8H2	A0A1L9P5Y8	A0A1L9P8H2	A0A1L9P5Y8	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.980
A0A1L9P8H2	A0A1L9P9S1	A0A1L9P8H2	A0A1L9P9S1	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1L9P8H2	A0A1L9PAR2	A0A1L9P8H2	A0A1L9PAR2	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.998