31 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PVU7	Uncharacterized protein. (76 aa)
	A0A1L9P9E1	RING-type domain-containing protein. (375 aa)
	A0A1L9P9I6	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1014 aa)
	A0A1L9PC34	CYCLIN domain-containing protein; Belongs to the cyclin family. (421 aa)
	A0A1L9PC60	Spt4 domain-containing protein. (92 aa)
	A0A1L9PE60	Uncharacterized protein. (72 aa)
	A0A1L9PFD7	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (842 aa)
	A0A1L9PIW9	RPOL9 domain-containing protein. (107 aa)
	A0A1L9PJ20	Nuclear cap-binding protein subunit 2. (177 aa)
	A0A1L9PJ89	RPOLD domain-containing protein. (336 aa)
	A0A1L9PMG8	Uncharacterized protein. (639 aa)
	A0A1L9PP63	Uncharacterized protein. (160 aa)
	A0A1L9PT36	Uncharacterized protein. (831 aa)
	A0A1L9PUY1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (347 aa)
	A0A1L9PV79	RNA_pol_L_2 domain-containing protein. (129 aa)
	A0A1L9P8V1	Uncharacterized protein. (169 aa)
	A0A1L9PW62	TPR_REGION domain-containing protein. (400 aa)
	A0A1L9PZD3	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (478 aa)
	A0A1L9Q174	Uncharacterized protein. (388 aa)
	A0A1L9Q2J7	Uncharacterized protein. (829 aa)
	A0A1L9Q306	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (456 aa)
	A0A1L9Q4N5	Uncharacterized protein. (74 aa)
	A0A1L9Q4Q5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	A0A1L9Q5F7	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (708 aa)
	A0A1L9P3L7	Uncharacterized protein. (378 aa)
	A0A1L9P413	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
	A0A1L9P5T9	Helicase ATP-binding domain-containing protein. (789 aa)
	A0A1L9P5W4	Uncharacterized protein. (236 aa)
	A0A1L9P650	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1745 aa)
	A0A1L9P8R7	Uncharacterized protein. (520 aa)
	A0A1L9P8T5	Uncharacterized protein. (372 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P3L7	A0A1L9P413	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.978
A0A1L9P3L7	A0A1L9P5T9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
A0A1L9P3L7	A0A1L9P5W4	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1L9P3L7	A0A1L9P650	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.976
A0A1L9P3L7	A0A1L9P8R7	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A1L9P3L7	A0A1L9P8T5	Uncharacterized protein.	Uncharacterized protein.	0.972
A0A1L9P3L7	A0A1L9P8V1	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A1L9P3L7	A0A1L9P9E1	Uncharacterized protein.	RING-type domain-containing protein.	0.996
A0A1L9P3L7	A0A1L9P9I6	Uncharacterized protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.749
A0A1L9P3L7	A0A1L9PC34	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.995
A0A1L9P3L7	A0A1L9PE60	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L9P3L7	A0A1L9PIW9	Uncharacterized protein.	RPOL9 domain-containing protein.	0.978
A0A1L9P3L7	A0A1L9PJ89	Uncharacterized protein.	RPOLD domain-containing protein.	0.974
A0A1L9P3L7	A0A1L9PMG8	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L9P3L7	A0A1L9PP63	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A1L9P3L7	A0A1L9PT36	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A1L9P3L7	A0A1L9PUY1	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.996
A0A1L9P3L7	A0A1L9PV79	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.971
A0A1L9P3L7	A0A1L9PVU7	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1L9P3L7	A0A1L9PZD3	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999