(35 nodes) Toll Like Receptor 7/8 (TLR7/8) Cascade network (Aspergillus versicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9P6J4	Protein kinase domain-containing protein. (653 aa)
	A0A1L9PQ24	Uncharacterized protein. (706 aa)
	A0A1L9PP69	Metallophos domain-containing protein. (405 aa)
	A0A1L9PP54	Mitogen-activated protein kinase. (261 aa)
	A0A1L9PCE7	RING-type domain-containing protein. (446 aa)
	A0A1L9P6V6	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (365 aa)
	A0A1L9PQB6	Uncharacterized protein. (347 aa)
	A0A1L9P346	BZIP domain-containing protein. (297 aa)
	A0A1L9P2W1	TYR_PHOSPHATASE_2 domain-containing protein. (290 aa)
	A0A1L9PDK4	BZIP domain-containing protein. (273 aa)
	A0A1L9PFC7	BZIP domain-containing protein. (489 aa)
	A0A1L9PGB4	Ubiquitin-like domain-containing protein. (239 aa)
	A0A1L9PHL7	Protein kinase domain-containing protein. (525 aa)
	A0A1L9PJ69	Uncharacterized protein. (301 aa)
	A0A1L9PJU6	Uncharacterized protein. (345 aa)
	A0A1L9PJY3	Serine/threonine-protein phosphatase. (329 aa)
	A0A1L9PM09	Uncharacterized protein. (503 aa)
	A0A1L9PMU6	Uncharacterized protein. (437 aa)
	A0A1L9PMV4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (420 aa)
	A0A1L9PNW1	APH domain-containing protein. (237 aa)
	A0A1L9Q573	Uncharacterized protein. (239 aa)
	A0A1L9Q572	APH domain-containing protein. (554 aa)
	A0A1L9Q1R1	NACHT domain-containing protein. (1340 aa)
	A0A1L9PZR2	NACHT domain-containing protein. (1472 aa)
	A0A1L9PXZ9	Uncharacterized protein. (203 aa)
	A0A1L9PXI3	Uncharacterized protein. (150 aa)
	A0A1L9PWC5	EF-hand domain-containing protein. (281 aa)
	A0A1L9PWB2	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (346 aa)
	A0A1L9PVZ3	BZIP domain-containing protein. (561 aa)
	A0A1L9PV53	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (498 aa)
	A0A1L9PU02	BZIP domain-containing protein. (326 aa)
	A0A1L9PRV3	Uncharacterized protein. (242 aa)
	A0A1L9PRD2	Uncharacterized protein. (616 aa)
	A0A1L9PQL7	BZIP domain-containing protein. (282 aa)
	A0A1L9PQC0	Uncharacterized protein. (256 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P346	A0A1L9P6V6	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.779
A0A1L9P346	A0A1L9PCE7	BZIP domain-containing protein.	RING-type domain-containing protein.	0.726
A0A1L9P346	A0A1L9PFC7	BZIP domain-containing protein.	BZIP domain-containing protein.	0.736
A0A1L9P346	A0A1L9PJ69	BZIP domain-containing protein.	Uncharacterized protein.	0.592
A0A1L9P346	A0A1L9PM09	BZIP domain-containing protein.	Uncharacterized protein.	0.592
A0A1L9P346	A0A1L9PMU6	BZIP domain-containing protein.	Uncharacterized protein.	0.716
A0A1L9P346	A0A1L9PMV4	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.768
A0A1L9P346	A0A1L9PNW1	BZIP domain-containing protein.	APH domain-containing protein.	0.592
A0A1L9P346	A0A1L9PP54	BZIP domain-containing protein.	Mitogen-activated protein kinase.	0.779
A0A1L9P346	A0A1L9PVZ3	BZIP domain-containing protein.	BZIP domain-containing protein.	0.865
A0A1L9P346	A0A1L9PWB2	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.768
A0A1L9P346	A0A1L9PXI3	BZIP domain-containing protein.	Uncharacterized protein.	0.592
A0A1L9P346	A0A1L9Q572	BZIP domain-containing protein.	APH domain-containing protein.	0.592
A0A1L9P6J4	A0A1L9P6V6	Protein kinase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.990
A0A1L9P6J4	A0A1L9PFC7	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.512
A0A1L9P6J4	A0A1L9PHL7	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.871
A0A1L9P6J4	A0A1L9PJY3	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase.	0.764
A0A1L9P6J4	A0A1L9PMU6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.512
A0A1L9P6J4	A0A1L9PMV4	Protein kinase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.939
A0A1L9P6J4	A0A1L9PP54	Protein kinase domain-containing protein.	Mitogen-activated protein kinase.	0.988