11 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PRC8	HTH CENPB-type domain-containing protein. (542 aa)
	A0A1L9P3W2	DUF1115 domain-containing protein. (305 aa)
	A0A1L9P7P9	Ubiquitin-like domain-containing protein. (92 aa)
	A0A1L9PAB4	Uncharacterized protein. (405 aa)
	A0A1L9PB73	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (614 aa)
	A0A1L9PBY8	ThiF domain-containing protein. (382 aa)
	A0A1L9PIQ7	Uncharacterized protein. (386 aa)
	A0A1L9PMH0	HTH CENPB-type domain-containing protein. (465 aa)
	A0A1L9PMS3	Uncharacterized protein. (198 aa)
	A0A1L9PQ97	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	A0A1L9PVL4	Uncharacterized protein. (320 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9P3W2	A0A1L9PB73	DUF1115 domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.416
A0A1L9P3W2	A0A1L9PBY8	DUF1115 domain-containing protein.	ThiF domain-containing protein.	0.518
A0A1L9P3W2	A0A1L9PQ97	DUF1115 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.863
A0A1L9P7P9	A0A1L9PB73	Ubiquitin-like domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.985
A0A1L9P7P9	A0A1L9PBY8	Ubiquitin-like domain-containing protein.	ThiF domain-containing protein.	0.988
A0A1L9P7P9	A0A1L9PQ97	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.999
A0A1L9PAB4	A0A1L9PQ97	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.686
A0A1L9PB73	A0A1L9P3W2	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	DUF1115 domain-containing protein.	0.416
A0A1L9PB73	A0A1L9P7P9	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	Ubiquitin-like domain-containing protein.	0.985
A0A1L9PB73	A0A1L9PBY8	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	ThiF domain-containing protein.	0.999
A0A1L9PB73	A0A1L9PMH0	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	HTH CENPB-type domain-containing protein.	0.416
A0A1L9PB73	A0A1L9PQ97	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.995
A0A1L9PBY8	A0A1L9P3W2	ThiF domain-containing protein.	DUF1115 domain-containing protein.	0.518
A0A1L9PBY8	A0A1L9P7P9	ThiF domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
A0A1L9PBY8	A0A1L9PB73	ThiF domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.999
A0A1L9PBY8	A0A1L9PMH0	ThiF domain-containing protein.	HTH CENPB-type domain-containing protein.	0.518
A0A1L9PBY8	A0A1L9PQ97	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.988
A0A1L9PIQ7	A0A1L9PQ97	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.686
A0A1L9PMH0	A0A1L9PB73	HTH CENPB-type domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.416
A0A1L9PMH0	A0A1L9PBY8	HTH CENPB-type domain-containing protein.	ThiF domain-containing protein.	0.518