37 items (Aspergillus versicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9PGB4	Ubiquitin-like domain-containing protein. (239 aa)
	A0A1L9Q3D6	Uncharacterized protein. (156 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (442 aa)
	A0A1L9Q1Q0	Protein kinase domain-containing protein. (295 aa)
	A0A1L9Q027	Uncharacterized protein. (220 aa)
	A0A1L9PZP4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2452 aa)
	A0A1L9PZI1	Protein kinase domain-containing protein. (518 aa)
	A0A1L9PZD2	Uncharacterized protein. (1167 aa)
	A0A1L9PZC0	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (283 aa)
	A0A1L9PY98	Protein kinase domain-containing protein. (263 aa)
	A0A1L9PU32	Uncharacterized protein. (335 aa)
	A0A1L9PSX9	AA_TRNA_LIGASE_II domain-containing protein. (574 aa)
	A0A1L9PSU1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (603 aa)
	A0A1L9PRS9	FHA domain-containing protein. (694 aa)
	A0A1L9PRD1	Uncharacterized protein. (370 aa)
	A0A1L9PR00	Uncharacterized protein. (435 aa)
	A0A1L9PQL7	BZIP domain-containing protein. (282 aa)
	A0A1L9PQI6	Uncharacterized protein. (595 aa)
	A0A1L9PPV8	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (629 aa)
	A0A1L9PPF5	FHA domain-containing protein. (752 aa)
	A0A1L9PMY0	3'-5' exonuclease domain-containing protein. (419 aa)
	A0A1L9PM85	Protein kinase domain-containing protein. (532 aa)
	A0A1L9PHI7	Histone H2B; Belongs to the histone H2B family. (140 aa)
	A0A1L9PFY0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (411 aa)
	A0A1L9PF56	DUF1767 domain-containing protein. (232 aa)
	A0A1L9PEJ9	ERCC4 domain-containing protein. (596 aa)
	A0A1L9PEH1	Uncharacterized protein. (818 aa)
	A0A1L9PE93	Uncharacterized protein. (426 aa)
	A0A1L9PE02	Protein kinase domain-containing protein. (353 aa)
	A0A1L9PDD5	Uncharacterized protein. (470 aa)
	A0A1L9PB25	Uncharacterized protein. (185 aa)
	A0A1L9PAY2	Uncharacterized protein. (1546 aa)
	A0A1L9P3Y5	Serine/threonine-protein phosphatase. (320 aa)
	A0A1L9P3G5	Serine/threonine-protein phosphatase. (424 aa)
	A0A1L9P343	Uncharacterized protein. (785 aa)
	A0A1L9P334	Uncharacterized protein. (585 aa)
	A0A1L9P302	Uncharacterized protein. (410 aa)

Your Current Organism:

Aspergillus versicolor

NCBI taxonomy Id: 1036611
Other names: A. versicolor CBS 583.65, Aspergillus versicolor CBS 583.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9P302	A0A1L9P334	A0A1L9P302	A0A1L9P334	Uncharacterized protein.	Uncharacterized protein.	0.520
A0A1L9P302	A0A1L9PGB4	A0A1L9P302	A0A1L9PGB4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.750
A0A1L9P302	A0A1L9PHI7	A0A1L9P302	A0A1L9PHI7	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.538
A0A1L9P302	A0A1L9PQL7	A0A1L9P302	A0A1L9PQL7	Uncharacterized protein.	BZIP domain-containing protein.	0.750
A0A1L9P334	A0A1L9P302	A0A1L9P334	A0A1L9P302	Uncharacterized protein.	Uncharacterized protein.	0.520
A0A1L9P334	A0A1L9PGB4	A0A1L9P334	A0A1L9PGB4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.750
A0A1L9P334	A0A1L9PHI7	A0A1L9P334	A0A1L9PHI7	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.538
A0A1L9P334	A0A1L9PQL7	A0A1L9P334	A0A1L9PQL7	Uncharacterized protein.	BZIP domain-containing protein.	0.750
A0A1L9P343	A0A1L9PAY2	A0A1L9P343	A0A1L9PAY2	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A1L9P343	A0A1L9PDD5	A0A1L9P343	A0A1L9PDD5	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A1L9P343	A0A1L9PE02	A0A1L9P343	A0A1L9PE02	Uncharacterized protein.	Protein kinase domain-containing protein.	0.802
A0A1L9P343	A0A1L9PEH1	A0A1L9P343	A0A1L9PEH1	Uncharacterized protein.	Uncharacterized protein.	0.695
A0A1L9P343	A0A1L9PEJ9	A0A1L9P343	A0A1L9PEJ9	Uncharacterized protein.	ERCC4 domain-containing protein.	0.547
A0A1L9P343	A0A1L9PF56	A0A1L9P343	A0A1L9PF56	Uncharacterized protein.	DUF1767 domain-containing protein.	0.772
A0A1L9P343	A0A1L9PM85	A0A1L9P343	A0A1L9PM85	Uncharacterized protein.	Protein kinase domain-containing protein.	0.894
A0A1L9P343	A0A1L9PMY0	A0A1L9P343	A0A1L9PMY0	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.991
A0A1L9P343	A0A1L9PPV8	A0A1L9P343	A0A1L9PPV8	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.746
A0A1L9P343	A0A1L9PQI6	A0A1L9P343	A0A1L9PQI6	Uncharacterized protein.	Uncharacterized protein.	0.786
A0A1L9P343	A0A1L9PR00	A0A1L9P343	A0A1L9PR00	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A1L9P343	A0A1L9PRD1	A0A1L9P343	A0A1L9PRD1	Uncharacterized protein.	Uncharacterized protein.	0.702