(5 nodes) Amino acid permease, conserved site, and Amino acid permease network (Aspergillus sydowii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SZA0	Uncharacterized protein. (589 aa)
	A0A1L9THA3	AA_permease domain-containing protein. (569 aa)
	A0A1L9TLW6	Uncharacterized protein. (519 aa)
	A0A1L9TN05	Uncharacterized protein. (315 aa)
	A0A1L9TQ82	AA_permease domain-containing protein. (552 aa)

Your Current Organism:

Aspergillus sydowii

NCBI taxonomy Id: 1036612
Other names: A. sydowii CBS 593.65, Aspergillus sydowii CBS 593.65

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9SZA0	A0A1L9THA3	Uncharacterized protein.	AA_permease domain-containing protein.	0.546
A0A1L9SZA0	A0A1L9TN05	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A1L9SZA0	A0A1L9TQ82	Uncharacterized protein.	AA_permease domain-containing protein.	0.497
A0A1L9THA3	A0A1L9SZA0	AA_permease domain-containing protein.	Uncharacterized protein.	0.546
A0A1L9THA3	A0A1L9TLW6	AA_permease domain-containing protein.	Uncharacterized protein.	0.530
A0A1L9THA3	A0A1L9TN05	AA_permease domain-containing protein.	Uncharacterized protein.	0.412
A0A1L9TLW6	A0A1L9THA3	Uncharacterized protein.	AA_permease domain-containing protein.	0.530
A0A1L9TLW6	A0A1L9TN05	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A1L9TLW6	A0A1L9TQ82	Uncharacterized protein.	AA_permease domain-containing protein.	0.452
A0A1L9TN05	A0A1L9SZA0	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A1L9TN05	A0A1L9THA3	Uncharacterized protein.	AA_permease domain-containing protein.	0.412
A0A1L9TN05	A0A1L9TLW6	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A1L9TN05	A0A1L9TQ82	Uncharacterized protein.	AA_permease domain-containing protein.	0.412
A0A1L9TQ82	A0A1L9SZA0	AA_permease domain-containing protein.	Uncharacterized protein.	0.497
A0A1L9TQ82	A0A1L9TLW6	AA_permease domain-containing protein.	Uncharacterized protein.	0.452
A0A1L9TQ82	A0A1L9TN05	AA_permease domain-containing protein.	Uncharacterized protein.	0.412