11 items (Aspergillus sydowii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9T3U3	Uncharacterized protein. (145 aa)
	A0A1L9T8C7	Uncharacterized protein. (159 aa)
	A0A1L9TCB7	Uncharacterized protein. (807 aa)
	A0A1L9TF41	Uncharacterized protein. (637 aa)
	A0A1L9TF81	Uncharacterized protein. (296 aa)
	A0A1L9TQ19	Uncharacterized protein. (346 aa)
	A0A1L9TRG8	HTH myb-type domain-containing protein. (833 aa)
	A0A1L9TS69	SWIB domain-containing protein. (273 aa)
	A0A1L9TTB1	Uncharacterized protein. (93 aa)
	A0A1L9TU54	Uncharacterized protein. (210 aa)
	A0A1L9TV84	Uncharacterized protein. (244 aa)

Your Current Organism:

Aspergillus sydowii

NCBI taxonomy Id: 1036612
Other names: A. sydowii CBS 593.65, Aspergillus sydowii CBS 593.65

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9T3U3	A0A1L9TCB7	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9T3U3	A0A1L9TF81	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A1L9T3U3	A0A1L9TQ19	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A1L9T3U3	A0A1L9TRG8	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.527
A0A1L9T3U3	A0A1L9TS69	Uncharacterized protein.	SWIB domain-containing protein.	0.801
A0A1L9T3U3	A0A1L9TU54	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9T3U3	A0A1L9TV84	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9T8C7	A0A1L9TCB7	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9T8C7	A0A1L9TF81	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A1L9T8C7	A0A1L9TQ19	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A1L9T8C7	A0A1L9TRG8	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.527
A0A1L9T8C7	A0A1L9TS69	Uncharacterized protein.	SWIB domain-containing protein.	0.801
A0A1L9T8C7	A0A1L9TU54	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9T8C7	A0A1L9TV84	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9TCB7	A0A1L9T3U3	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9TCB7	A0A1L9T8C7	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A1L9TCB7	A0A1L9TF41	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A1L9TCB7	A0A1L9TF81	Uncharacterized protein.	Uncharacterized protein.	0.880
A0A1L9TCB7	A0A1L9TQ19	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1L9TCB7	A0A1L9TRG8	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.559