STRINGSTRING
A0A1L9TIR1 A0A1L9TIR1 A0A1L9TJ20 A0A1L9TJ20 LSM5 LSM5 A0A1L9TK02 A0A1L9TK02 A0A1L9TEL2 A0A1L9TEL2 A0A1L9TEK3 A0A1L9TEK3 A0A1L9TEI0 A0A1L9TEI0 TRM8 TRM8 A0A1L9TCJ9 A0A1L9TCJ9 TIF32 TIF32 A0A1L9TC33 A0A1L9TC33 A0A1L9TC32 A0A1L9TC32 A0A1L9TBL8 A0A1L9TBL8 A0A1L9TB88 A0A1L9TB88 A0A1L9TB59 A0A1L9TB59 A0A1L9TB28 A0A1L9TB28 A0A1L9TAY6 A0A1L9TAY6 A0A1L9TAA2 A0A1L9TAA2 A0A1L9TA74 A0A1L9TA74 A0A1L9T8B5 A0A1L9T8B5 A0A1L9T865 A0A1L9T865 A0A1L9T7C4 A0A1L9T7C4 A0A1L9T783 A0A1L9T783 A0A1L9T6U8 A0A1L9T6U8 A0A1L9T6T9 A0A1L9T6T9 A0A1L9T6S6 A0A1L9T6S6 A0A1L9T6Q4 A0A1L9T6Q4 A0A1L9T5D1 A0A1L9T5D1 A0A1L9T3Q3 A0A1L9T3Q3 A0A1L9T3N4 A0A1L9T3N4 A0A1L9T3M5 A0A1L9T3M5 A0A1L9T3F7 A0A1L9T3F7 A0A1L9T3E1 A0A1L9T3E1 A0A1L9T3C7 A0A1L9T3C7 A0A1L9T3B2 A0A1L9T3B2 A0A1L9T1H4 A0A1L9T1H4 A0A1L9T0W0 A0A1L9T0W0 A0A1L9T0U8 A0A1L9T0U8 A0A1L9T0T5 A0A1L9T0T5 A0A1L9T0R2 A0A1L9T0R2 A0A1L9SZJ7 A0A1L9SZJ7 A0A1L9SXP7 A0A1L9SXP7 A0A1L9SXH0 A0A1L9SXH0 A0A1L9TKL9 A0A1L9TKL9 A0A1L9TKP5 A0A1L9TKP5 A0A1L9TKW6 A0A1L9TKW6 A0A1L9TKY0 A0A1L9TKY0 A0A1L9TL40 A0A1L9TL40 A0A1L9TL80 A0A1L9TL80 A0A1L9TMD6 A0A1L9TMD6 A0A1L9TMM9 A0A1L9TMM9 A0A1L9TMQ7 A0A1L9TMQ7 A0A1L9TMZ0 A0A1L9TMZ0 A0A1L9TNK0 A0A1L9TNK0 A0A1L9TNR7 A0A1L9TNR7 CLU1 CLU1 A0A1L9TP24 A0A1L9TP24 A0A1L9TP47 A0A1L9TP47 A0A1L9TP85 A0A1L9TP85 A0A1L9TPB7 A0A1L9TPB7 A0A1L9TPD2 A0A1L9TPD2 A0A1L9TPF5 A0A1L9TPF5 A0A1L9TPH8 A0A1L9TPH8 A0A1L9TPI0 A0A1L9TPI0 A0A1L9TPQ1 A0A1L9TPQ1 A0A1L9TQ68 A0A1L9TQ68 A0A1L9TQE4 A0A1L9TQE4 A0A1L9TQG6 A0A1L9TQG6 A0A1L9TQI0 A0A1L9TQI0 A0A1L9TR14 A0A1L9TR14 A0A1L9TR75 A0A1L9TR75 LSM3 LSM3 A0A1L9TRJ6 A0A1L9TRJ6 A0A1L9TRK5 A0A1L9TRK5 A0A1L9TRM7 A0A1L9TRM7 A0A1L9TS38 A0A1L9TS38 PRT1 PRT1 A0A1L9TSJ6 A0A1L9TSJ6 NCS6 NCS6 A0A1L9TSV7 A0A1L9TSV7 A0A1L9TSZ9 A0A1L9TSZ9 A0A1L9TT02 A0A1L9TT02 A0A1L9TT98 A0A1L9TT98 A0A1L9TTA0 A0A1L9TTA0 LSM8 LSM8 A0A1L9TVN2 A0A1L9TVN2 A0A1L9TVD9 A0A1L9TVD9 A0A1L9TTU9 A0A1L9TTU9 A0A1L9TV93 A0A1L9TV93 A0A1L9TV68 A0A1L9TV68 A0A1L9TV55 A0A1L9TV55 ALA1 ALA1 A0A1L9TUK5 A0A1L9TUK5 A0A1L9TUK0 A0A1L9TUK0 SHE3 SHE3 A0A1L9U0K3 A0A1L9U0K3 A0A1L9U060 A0A1L9U060 A0A1L9U043 A0A1L9U043 A0A1L9TZW7 A0A1L9TZW7 A0A1L9TZS1 A0A1L9TZS1 A0A1L9TY90 A0A1L9TY90 A0A1L9TY63 A0A1L9TY63 A0A1L9TXN5 A0A1L9TXN5 A0A1L9TXB3 A0A1L9TXB3 A0A1L9TWP7 A0A1L9TWP7 A0A1L9TWD5 A0A1L9TWD5 A0A1L9TW25 A0A1L9TW25 A0A1L9TW10 A0A1L9TW10 A0A1L9TEY2 A0A1L9TEY2 A0A1L9TF14 A0A1L9TF14 A0A1L9TFB9 A0A1L9TFB9 A0A1L9TFK3 A0A1L9TFK3 A0A1L9TFZ5 A0A1L9TFZ5 A0A1L9TG66 A0A1L9TG66 A0A1L9TGE2 A0A1L9TGE2 A0A1L9TGT4 A0A1L9TGT4 TIF35 TIF35 A0A1L9TH61 A0A1L9TH61 A0A1L9THF8 A0A1L9THF8 LSM1 LSM1 LSM4 LSM4 A0A1L9THR3 A0A1L9THR3 A0A1L9TI02 A0A1L9TI02 A0A1L9TIB1 A0A1L9TIB1 A0A1L9TIN2 A0A1L9TIN2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1L9TIR1RRM domain-containing protein. (188 aa)
A0A1L9TJ20H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (208 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A1L9TK02Uncharacterized protein. (484 aa)
A0A1L9TEL2Uncharacterized protein. (831 aa)
A0A1L9TEK3Uncharacterized protein. (448 aa)
A0A1L9TEI0RRM domain-containing protein. (113 aa)
TRM8tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (351 aa)
A0A1L9TCJ9RNA-dependent RNA polymerase. (1159 aa)
TIF32Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1029 aa)
A0A1L9TC33Uncharacterized protein. (1297 aa)
A0A1L9TC32RRM domain-containing protein. (280 aa)
A0A1L9TBL8D-aminoacyl-tRNA deacylase. (164 aa)
A0A1L9TB88SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (775 aa)
A0A1L9TB59Uncharacterized protein. (609 aa)
A0A1L9TB28Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (277 aa)
A0A1L9TAY6Uncharacterized protein. (604 aa)
A0A1L9TAA2S4 RNA-binding domain-containing protein. (463 aa)
A0A1L9TA74RRM domain-containing protein; Belongs to the cytochrome P450 family. (1386 aa)
A0A1L9T8B5RRM domain-containing protein. (383 aa)
A0A1L9T865Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1409 aa)
A0A1L9T7C4RNA-dependent RNA polymerase. (1289 aa)
A0A1L9T783Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1032 aa)
A0A1L9T6U8RRM domain-containing protein. (308 aa)
A0A1L9T6T9U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (560 aa)
A0A1L9T6S6Uncharacterized protein. (361 aa)
A0A1L9T6Q4Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
A0A1L9T5D160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
A0A1L9T3Q3Uncharacterized protein. (397 aa)
A0A1L9T3N4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (462 aa)
A0A1L9T3M5RRM domain-containing protein. (314 aa)
A0A1L9T3F7Uncharacterized protein. (720 aa)
A0A1L9T3E1Uncharacterized protein. (540 aa)
A0A1L9T3C7Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (503 aa)
A0A1L9T3B2Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (340 aa)
A0A1L9T1H4RRM domain-containing protein. (159 aa)
A0A1L9T0W0RRM domain-containing protein. (460 aa)
A0A1L9T0U8Uncharacterized protein. (718 aa)
A0A1L9T0T5Uncharacterized protein. (209 aa)
A0A1L9T0R2Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (714 aa)
A0A1L9SZJ7Uncharacterized protein. (380 aa)
A0A1L9SXP7RRM domain-containing protein. (610 aa)
A0A1L9SXH0Uncharacterized protein. (664 aa)
A0A1L9TKL9RRM domain-containing protein. (83 aa)
A0A1L9TKP5tRNA-binding domain-containing protein. (1441 aa)
A0A1L9TKW6RRM domain-containing protein. (225 aa)
A0A1L9TKY0Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (703 aa)
A0A1L9TL40Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (614 aa)
A0A1L9TL80KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (267 aa)
A0A1L9TMD6RNA helicase. (641 aa)
A0A1L9TMM9Cleavage and polyadenylation specificity factor subunit 2. (1003 aa)
A0A1L9TMQ7RRM domain-containing protein. (665 aa)
A0A1L9TMZ0RRM domain-containing protein. (120 aa)
A0A1L9TNK0RRM domain-containing protein. (884 aa)
A0A1L9TNR7Uncharacterized protein. (294 aa)
CLU1Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. (1252 aa)
A0A1L9TP24Uncharacterized protein. (247 aa)
A0A1L9TP47Uncharacterized protein. (688 aa)
A0A1L9TP85S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (193 aa)
A0A1L9TPB7Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
A0A1L9TPD2THUMP domain-containing protein. (266 aa)
A0A1L9TPF540S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
A0A1L9TPH8RRM domain-containing protein. (172 aa)
A0A1L9TPI0RRM domain-containing protein. (331 aa)
A0A1L9TPQ1RNA-dependent RNA polymerase. (1340 aa)
A0A1L9TQ68rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (406 aa)
A0A1L9TQE4Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (245 aa)
A0A1L9TQG6U3 small nucleolar RNA-associated protein 22. (1112 aa)
A0A1L9TQI0Uncharacterized protein. (376 aa)
A0A1L9TR14RRM domain-containing protein. (375 aa)
A0A1L9TR75RRM domain-containing protein. (259 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A1L9TRJ6Uncharacterized protein. (252 aa)
A0A1L9TRK5Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1483 aa)
A0A1L9TRM7Uncharacterized protein; Belongs to the DEAD box helicase family. (779 aa)
A0A1L9TS38RRM domain-containing protein. (416 aa)
PRT1Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (738 aa)
A0A1L9TSJ6Uncharacterized protein. (839 aa)
NCS6Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. (422 aa)
A0A1L9TSV7ATP-dependent RNA helicase DBP10. (942 aa)
A0A1L9TSZ9Uncharacterized protein. (612 aa)
A0A1L9TT02RNA helicase. (816 aa)
A0A1L9TT98SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (574 aa)
A0A1L9TTA0RRM domain-containing protein. (576 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A1L9TVN2RRM domain-containing protein. (396 aa)
A0A1L9TVD9HTH La-type RNA-binding domain-containing protein. (803 aa)
A0A1L9TTU9SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (880 aa)
A0A1L9TV93Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A0A1L9TV68RRM domain-containing protein. (531 aa)
A0A1L9TV55RRM domain-containing protein. (186 aa)
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (965 aa)
A0A1L9TUK5Small nuclear ribonucleoprotein G. (78 aa)
A0A1L9TUK0Uncharacterized protein. (374 aa)
SHE3SWI5-dependent HO expression protein 3; RNA-binding protein that binds specific mRNAs including the ASH1 mRNA, coding for a repressor of the HO endonuclease. Part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud and in the daughter cell. Belongs to the SHE3 family. (353 aa)
A0A1L9U0K3Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (1103 aa)
A0A1L9U060S4 RNA-binding domain-containing protein. (536 aa)
A0A1L9U043RRM domain-containing protein. (489 aa)
A0A1L9TZW7Uncharacterized protein. (416 aa)
A0A1L9TZS1Uncharacterized protein. (354 aa)
A0A1L9TY90U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (228 aa)
A0A1L9TY63RNA helicase. (613 aa)
A0A1L9TXN5RRM domain-containing protein. (91 aa)
A0A1L9TXB3RING-type domain-containing protein. (813 aa)
A0A1L9TWP7Uncharacterized protein. (569 aa)
A0A1L9TWD5Uncharacterized protein. (395 aa)
A0A1L9TW25Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (233 aa)
A0A1L9TW10Uncharacterized protein. (892 aa)
A0A1L9TEY2Uncharacterized protein. (1194 aa)
A0A1L9TF14Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (587 aa)
A0A1L9TFB9Sm domain-containing protein. (88 aa)
A0A1L9TFK3RRM domain-containing protein. (627 aa)
A0A1L9TFZ5RRM domain-containing protein. (326 aa)
A0A1L9TG66RRM domain-containing protein. (220 aa)
A0A1L9TGE2KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (359 aa)
A0A1L9TGT4RRM domain-containing protein. (267 aa)
TIF35Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (288 aa)
A0A1L9TH61RRM domain-containing protein. (294 aa)
A0A1L9THF8S4 RNA-binding domain-containing protein. (188 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (143 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
A0A1L9THR3Nuclear cap-binding protein subunit 2. (177 aa)
A0A1L9TI02Uncharacterized protein. (739 aa)
A0A1L9TIB1RRM domain-containing protein. (153 aa)
A0A1L9TIN2Sm domain-containing protein. (80 aa)
Your Current Organism:
Aspergillus sydowii
NCBI taxonomy Id: 1036612
Other names: A. sydowii CBS 593.65, Aspergillus sydowii CBS 593.65
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