(41 nodes) Formation of TC-NER Pre-Incision Complex network (Aspergillus sydowii)

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

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Your Input:
	A0A1L9T3Q7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	A0A1L9TZU7	MPN domain-containing protein. (386 aa)
	A0A1L9TZT6	CYCLIN domain-containing protein; Belongs to the cyclin family. (424 aa)
	A0A1L9TXE2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1740 aa)
	A0A1L9TX61	Uncharacterized protein. (345 aa)
	A0A1L9TV21	PCI domain-containing protein. (499 aa)
	A0A1L9TUZ0	PCI domain-containing protein. (215 aa)
	A0A1L9TUS3	Uncharacterized protein. (169 aa)
	A0A1L9TUI9	Uncharacterized protein. (523 aa)
	A0A1L9TUD3	PCI domain-containing protein. (412 aa)
	A0A1L9TTX3	Uncharacterized protein. (236 aa)
	A0A1L9TTQ5	Helicase ATP-binding domain-containing protein. (789 aa)
	A0A1L9TSX9	CPSF_A domain-containing protein. (1128 aa)
	A0A1L9TRL6	Uncharacterized protein. (378 aa)
	A0A1L9TRL5	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
	A0A1L9TR30	CULLIN_2 domain-containing protein; Belongs to the cullin family. (2531 aa)
	A0A1L9TPC4	PCI domain-containing protein. (508 aa)
	A0A1L9TP25	Ubiquitin-like domain-containing protein. (154 aa)
	A0A1L9TNS8	Uncharacterized protein. (333 aa)
	A0A1L9TLZ4	Uncharacterized protein. (72 aa)
	A0A1L9TKN9	Uncharacterized protein. (1019 aa)
	A0A1L9TJR6	Uncharacterized protein. (1164 aa)
	A0A1L9TJI8	Uncharacterized protein. (649 aa)
	A0A1L9TIB1	RRM domain-containing protein. (153 aa)
	A0A1L9THW8	RPOLD domain-containing protein. (336 aa)
	A0A1L9THC6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	A0A1L9TG47	Uncharacterized protein. (498 aa)
	A0A1L9TEI5	RNA_pol_L_2 domain-containing protein. (129 aa)
	A0A1L9TDL7	PCI domain-containing protein. (327 aa)
	A0A1L9TDK2	Uncharacterized protein. (75 aa)
	A0A1L9TCC9	Uncharacterized protein. (160 aa)
	A0A1L9TAN1	WD_REPEATS_REGION domain-containing protein. (473 aa)
	A0A1L9TA20	Uncharacterized protein. (826 aa)
	A0A1L9T8I6	Uncharacterized protein. (1116 aa)
	A0A1L9T8H7	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (478 aa)
	A0A1L9T7F1	RING-type domain-containing protein. (116 aa)
	A0A1L9T3I7	Uncharacterized protein. (74 aa)
	A0A1L9T3G6	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (453 aa)
	A0A1L9T381	Uncharacterized protein. (820 aa)
	A0A1L9T132	BZIP domain-containing protein. (283 aa)
	A0A1L9SXI0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (398 aa)

Your Current Organism:

Aspergillus sydowii

NCBI taxonomy Id: 1036612
Other names: A. sydowii CBS 593.65, Aspergillus sydowii CBS 593.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9SXI0	A0A1L9T132	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	BZIP domain-containing protein.	0.688
A0A1L9SXI0	A0A1L9T381	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
A0A1L9SXI0	A0A1L9T3G6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.992
A0A1L9SXI0	A0A1L9T3I7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.887
A0A1L9SXI0	A0A1L9T3Q7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
A0A1L9SXI0	A0A1L9T7F1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.711
A0A1L9SXI0	A0A1L9T8H7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.985
A0A1L9SXI0	A0A1L9T8I6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.693
A0A1L9SXI0	A0A1L9TAN1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.739
A0A1L9SXI0	A0A1L9TCC9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.906
A0A1L9SXI0	A0A1L9TDK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.897
A0A1L9SXI0	A0A1L9TEI5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA_pol_L_2 domain-containing protein.	0.905
A0A1L9SXI0	A0A1L9THC6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.897
A0A1L9SXI0	A0A1L9THW8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RPOLD domain-containing protein.	0.968
A0A1L9SXI0	A0A1L9TJI8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
A0A1L9SXI0	A0A1L9TKN9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.693
A0A1L9SXI0	A0A1L9TLZ4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.846
A0A1L9SXI0	A0A1L9TNS8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.978
A0A1L9SXI0	A0A1L9TP25	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-like domain-containing protein.	0.688
A0A1L9SXI0	A0A1L9TR30	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.742