37 items (Aspergillus sydowii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9TXY9	Uncharacterized protein. (852 aa)
	A0A1L9SXI0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (398 aa)
	A0A1L9T0M4	Uncharacterized protein. (710 aa)
	A0A1L9T345	Protein kinase domain-containing protein. (1010 aa)
	A0A1L9T381	Uncharacterized protein. (820 aa)
	A0A1L9T3G6	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (453 aa)
	A0A1L9T3I7	Uncharacterized protein. (74 aa)
	A0A1L9T3Q7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	A0A1L9T6X2	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (576 aa)
	A0A1L9T7I4	Protein kinase domain-containing protein. (549 aa)
	A0A1L9T8H7	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (478 aa)
	A0A1L9TA54	Uncharacterized protein. (1028 aa)
	A0A1L9TCC9	Uncharacterized protein. (160 aa)
	A0A1L9TDK2	Uncharacterized protein. (75 aa)
	A0A1L9TEI5	RNA_pol_L_2 domain-containing protein. (129 aa)
	A0A1L9THC6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	A0A1L9THE9	Uncharacterized protein. (344 aa)
	A0A1L9THT8	Uncharacterized protein. (692 aa)
	A0A1L9THW8	RPOLD domain-containing protein. (336 aa)
	A0A1L9TJI8	Uncharacterized protein. (649 aa)
	A0A1L9TLZ4	Uncharacterized protein. (72 aa)
	A0A1L9TN79	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (841 aa)
	A0A1L9TNR2	Uncharacterized protein; Belongs to the cyclin family. (507 aa)
	A0A1L9TNS8	Uncharacterized protein. (333 aa)
	A0A1L9TP34	Uncharacterized protein. (304 aa)
	A0A1L9TRL5	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
	A0A1L9TRL6	Uncharacterized protein. (378 aa)
	A0A1L9TTQ5	Helicase ATP-binding domain-containing protein. (789 aa)
	A0A1L9TTX3	Uncharacterized protein. (236 aa)
	A0A1L9TUI9	Uncharacterized protein. (523 aa)
	A0A1L9TUJ0	Uncharacterized protein. (382 aa)
	A0A1L9TUS3	Uncharacterized protein. (169 aa)
	A0A1L9TX61	Uncharacterized protein. (345 aa)
	A0A1L9TX95	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1017 aa)
	A0A1L9TXE2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1740 aa)
	A0A1L9TZT6	CYCLIN domain-containing protein; Belongs to the cyclin family. (424 aa)
	A0A1L9U071	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)

Your Current Organism:

Aspergillus sydowii

NCBI taxonomy Id: 1036612
Other names: A. sydowii CBS 593.65, Aspergillus sydowii CBS 593.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9SXI0	A0A1L9T0M4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.905
A0A1L9SXI0	A0A1L9T345	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.874
A0A1L9SXI0	A0A1L9T381	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
A0A1L9SXI0	A0A1L9T3G6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.992
A0A1L9SXI0	A0A1L9T3I7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.887
A0A1L9SXI0	A0A1L9T3Q7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
A0A1L9SXI0	A0A1L9T6X2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.762
A0A1L9SXI0	A0A1L9T7I4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.872
A0A1L9SXI0	A0A1L9T8H7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.985
A0A1L9SXI0	A0A1L9TA54	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.729
A0A1L9SXI0	A0A1L9TCC9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.906
A0A1L9SXI0	A0A1L9TDK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.897
A0A1L9SXI0	A0A1L9TEI5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA_pol_L_2 domain-containing protein.	0.905
A0A1L9SXI0	A0A1L9THC6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.897
A0A1L9SXI0	A0A1L9THT8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.792
A0A1L9SXI0	A0A1L9THW8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RPOLD domain-containing protein.	0.968
A0A1L9SXI0	A0A1L9TJI8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
A0A1L9SXI0	A0A1L9TLZ4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.846
A0A1L9SXI0	A0A1L9TN79	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.866
A0A1L9SXI0	A0A1L9TNR2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the cyclin family.	0.851