Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all0326 | all4107 | gene:10492334 | gene:10496155 | ORF_ID:all0326; unknown protein. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.474 |
| all0326 | alr3431 | gene:10492334 | gene:10495470 | ORF_ID:all0326; unknown protein. | Copper amine oxidase; ORF_ID:alr3431. | 0.645 |
| all0326 | alr4455 | gene:10492334 | gene:10496504 | ORF_ID:all0326; unknown protein. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.713 |
| all0326 | sodB | gene:10492334 | gene:10494974 | ORF_ID:all0326; unknown protein. | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.479 |
| all4107 | all0326 | gene:10496155 | gene:10492334 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | ORF_ID:all0326; unknown protein. | 0.474 |
| all4107 | alr3431 | gene:10496155 | gene:10495470 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Copper amine oxidase; ORF_ID:alr3431. | 0.474 |
| all4107 | alr4455 | gene:10496155 | gene:10496504 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.762 |
| all4107 | sodB | gene:10496155 | gene:10494974 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.722 |
| alr3431 | all0326 | gene:10495470 | gene:10492334 | Copper amine oxidase; ORF_ID:alr3431. | ORF_ID:all0326; unknown protein. | 0.645 |
| alr3431 | all4107 | gene:10495470 | gene:10496155 | Copper amine oxidase; ORF_ID:alr3431. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.474 |
| alr3431 | alr4455 | gene:10495470 | gene:10496504 | Copper amine oxidase; ORF_ID:alr3431. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.680 |
| alr3431 | sodB | gene:10495470 | gene:10494974 | Copper amine oxidase; ORF_ID:alr3431. | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.474 |
| alr4058 | alr4455 | gene:10496101 | gene:10496504 | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.941 |
| alr4455 | all0326 | gene:10496504 | gene:10492334 | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | ORF_ID:all0326; unknown protein. | 0.713 |
| alr4455 | all4107 | gene:10496504 | gene:10496155 | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.762 |
| alr4455 | alr3431 | gene:10496504 | gene:10495470 | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | Copper amine oxidase; ORF_ID:alr3431. | 0.680 |
| alr4455 | alr4058 | gene:10496504 | gene:10496101 | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | 0.941 |
| alr4455 | sodB | gene:10496504 | gene:10494974 | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.840 |
| sodB | all0326 | gene:10494974 | gene:10492334 | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | ORF_ID:all0326; unknown protein. | 0.479 |
| sodB | all4107 | gene:10494974 | gene:10496155 | Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.722 |
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