STRINGSTRING
all0571 all0571 asl0572 asl0572 cphA cphA all1140 all1140 alr1779 alr1779 all2506 all2506 alr2717 alr2717 alr2718 alr2718 alr3663 alr3663 cphA-2 cphA-2 cphB cphB all3922 all3922 all4350 all4350
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
all0571Cyanophycinase; Exopeptidase that catalyzes the hydrolytic cleavage of multi- L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides. (293 aa)
asl0572ORF_ID:asl0572; unknown protein. (75 aa)
cphACyanophycin synthetase; ORF_ID:alr0573; cphA gene product. (636 aa)
all1140ORF_ID:all1140; similar to N-acetylmuramoyl-L-alanine amidase. (313 aa)
alr1779ORF_ID:alr1779; similar to cyanophycin synthetase. (333 aa)
all2506Cyanophycinase; Exopeptidase that catalyzes the hydrolytic cleavage of multi- L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides. (323 aa)
alr2717ORF_ID:alr2717; hypothetical protein. (447 aa)
alr2718ORF_ID:alr2718; probable cobyric acid synthase. (273 aa)
alr3663ORF_ID:alr3663; unknown protein. (349 aa)
cphA-2Cyanophycin synthetase; Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer); In the C-terminal section; belongs to the MurCDEF family. (901 aa)
cphBCyanophycinase; Exopeptidase that catalyzes the hydrolytic cleavage of multi- L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides. (298 aa)
all3922L-asparaginase; Degrades proteins damaged by L-isoaspartyl residue formation (also known as beta-Asp residues). Probably performs the final step in the degradation of the reserve polymer cyanophycin (depolymerizes the building block L-beta-Asp-Arg). Also has L-asparaginase activity. (318 aa)
all4350ORF_ID:all4350; unknown protein. (434 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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