STRINGSTRING
alr0140 alr0140 alr0141 alr0141 alr1552 alr1552 alr1556 alr1556 alr3884 alr3884 alr4583 alr4583 all4778 all4778 all5003 all5003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alr0140Periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; ORF_ID:alr0140. (552 aa)
alr0141Permease protein of oligopeptide ABC transporter; ORF_ID:alr0141. (341 aa)
alr1552ATP-binding protein of ABC transporter; ORF_ID:alr1552; Belongs to the ABC transporter superfamily. (550 aa)
alr1556Permease protein of ABC transporter; ORF_ID:alr1556. (372 aa)
alr3884Periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; ORF_ID:alr3884. (595 aa)
alr4583Permease protein of peptide ABC transporter; ORF_ID:alr4583. (345 aa)
all4778ABC transporter ATP-binding protein; ORF_ID:all4778; Belongs to the ABC transporter superfamily. (627 aa)
all5003Permease protein of peptide ABC transporter; ORF_ID:all5003. (272 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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