12 items (Nostoc sp. PCC7120) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	all2981	Penicillin-binding protein; ORF_ID:all2981. (640 aa)
	alr4579	Penicillin-binding protein; ORF_ID:alr4579. (756 aa)
	alr5326	Penicillin-binding protein; ORF_ID:alr5326. (643 aa)
	alr0153	Penicillin-binding protein; ORF_ID:alr0153. (537 aa)
	alr5045	Penicillin-binding protein; ORF_ID:alr5045. (610 aa)
	all4770	ORF_ID:all4770; hypothetical protein. (170 aa)
	pbpB	Penicillin-binding protein 2; ORF_ID:alr5101. (763 aa)
	alr1666	ORF_ID:alr1666; probable D-alanyl-D-alanine carboxypeptidase. (487 aa)
	all2656	Serine-type D-Ala-D-Ala carboxypeptidase; ORF_ID:all2656. (414 aa)
	alr5324	Penicillin-binding protein; ORF_ID:alr5324. (643 aa)
	alr0054	ORF_ID:alr0054; hypothetical protein. (439 aa)
	all2952	Penicillin-binding protein; ORF_ID:all2952. (755 aa)

Your Current Organism:

Nostoc sp. PCC7120

NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
all2952	alr5045	gene:10494988	gene:10497103	Penicillin-binding protein; ORF_ID:all2952.	Penicillin-binding protein; ORF_ID:alr5045.	0.735
all2952	pbpB	gene:10494988	gene:10497160	Penicillin-binding protein; ORF_ID:all2952.	Penicillin-binding protein 2; ORF_ID:alr5101.	0.926
all2981	alr4579	gene:10495017	gene:10496629	Penicillin-binding protein; ORF_ID:all2981.	Penicillin-binding protein; ORF_ID:alr4579.	0.429
all2981	alr5045	gene:10495017	gene:10497103	Penicillin-binding protein; ORF_ID:all2981.	Penicillin-binding protein; ORF_ID:alr5045.	0.806
alr0054	alr1666	gene:10492058	gene:10493683	ORF_ID:alr0054; hypothetical protein.	ORF_ID:alr1666; probable D-alanyl-D-alanine carboxypeptidase.	0.929
alr1666	alr0054	gene:10493683	gene:10492058	ORF_ID:alr1666; probable D-alanyl-D-alanine carboxypeptidase.	ORF_ID:alr0054; hypothetical protein.	0.929
alr4579	all2981	gene:10496629	gene:10495017	Penicillin-binding protein; ORF_ID:alr4579.	Penicillin-binding protein; ORF_ID:all2981.	0.429
alr4579	alr5045	gene:10496629	gene:10497103	Penicillin-binding protein; ORF_ID:alr4579.	Penicillin-binding protein; ORF_ID:alr5045.	0.811
alr5045	all2952	gene:10497103	gene:10494988	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein; ORF_ID:all2952.	0.735
alr5045	all2981	gene:10497103	gene:10495017	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein; ORF_ID:all2981.	0.806
alr5045	alr4579	gene:10497103	gene:10496629	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein; ORF_ID:alr4579.	0.811
alr5045	alr5324	gene:10497103	gene:10497385	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein; ORF_ID:alr5324.	0.804
alr5045	alr5326	gene:10497103	gene:10497387	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein; ORF_ID:alr5326.	0.808
alr5045	pbpB	gene:10497103	gene:10497160	Penicillin-binding protein; ORF_ID:alr5045.	Penicillin-binding protein 2; ORF_ID:alr5101.	0.793
alr5324	alr5045	gene:10497385	gene:10497103	Penicillin-binding protein; ORF_ID:alr5324.	Penicillin-binding protein; ORF_ID:alr5045.	0.804
alr5326	alr5045	gene:10497387	gene:10497103	Penicillin-binding protein; ORF_ID:alr5326.	Penicillin-binding protein; ORF_ID:alr5045.	0.808
pbpB	all2952	gene:10497160	gene:10494988	Penicillin-binding protein 2; ORF_ID:alr5101.	Penicillin-binding protein; ORF_ID:all2952.	0.926
pbpB	alr5045	gene:10497160	gene:10497103	Penicillin-binding protein 2; ORF_ID:alr5101.	Penicillin-binding protein; ORF_ID:alr5045.	0.793

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