Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| agp | all0168 | gene:10496696 | gene:10492173 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Alpha-amylase; ORF_ID:all0168. | 0.877 |
| agp | all0875 | gene:10496696 | gene:10492888 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Malto-oligosyltrehalose trehalohydrolase; ORF_ID:all0875; probable alpha-glucanotransferase; Belongs to the glycosyl hydrolase 13 family. | 0.891 |
| agp | alr0031 | gene:10496696 | gene:10492035 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Glycogen (starch) synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.996 |
| agp | alr0188 | gene:10496696 | gene:10492195 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | GDP-mannose pyrophosphorylase; ORF_ID:alr0188. | 0.427 |
| agp | alr1050 | gene:10496696 | gene:10493064 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | 0.507 |
| agp | alr1879 | gene:10496696 | gene:10493898 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.999 |
| agp | alr3921 | gene:10496696 | gene:10495963 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.628 |
| agp | alr4385 | gene:10496696 | gene:10496434 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.634 |
| agp | gap2 | gene:10496696 | gene:10497120 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Glyceraldehyde-3-phosphate dehydrogenase; Gap2 has a major role in carbon fixation as a component of the Calvin cycle. Catalyzes the oxidative phosphorylation of glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NADP. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NADP to NADPH. The reduced NADPH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic p [...] | 0.564 |
| agp | glgB | gene:10496696 | gene:10492723 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.994 |
| agp | rbcS | gene:10496696 | gene:10493539 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.421 |
| all0168 | agp | gene:10492173 | gene:10496696 | Alpha-amylase; ORF_ID:all0168. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | 0.877 |
| all0168 | alr0031 | gene:10492173 | gene:10492035 | Alpha-amylase; ORF_ID:all0168. | Glycogen (starch) synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.819 |
| all0168 | alr1050 | gene:10492173 | gene:10493064 | Alpha-amylase; ORF_ID:all0168. | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | 0.413 |
| all0168 | alr1879 | gene:10492173 | gene:10493898 | Alpha-amylase; ORF_ID:all0168. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.822 |
| all0250 | all0251 | gene:10492258 | gene:10492259 | ORF_ID:all0250; hypothetical protein. | ORF_ID:all0251; hypothetical protein. | 0.403 |
| all0251 | all0250 | gene:10492259 | gene:10492258 | ORF_ID:all0251; hypothetical protein. | ORF_ID:all0250; hypothetical protein. | 0.403 |
| all0351 | alr3061 | gene:10492359 | gene:10495097 | ORF_ID:all0351; unknown protein. | ORF_ID:alr3061; similar to acetyltransferase. | 0.888 |
| all0423 | all0424 | gene:10492432 | gene:10492433 | ORF_ID:all0423; unknown protein. | ORF_ID:all0424; unknown protein. | 0.604 |
| all0424 | all0423 | gene:10492433 | gene:10492432 | ORF_ID:all0424; unknown protein. | ORF_ID:all0423; unknown protein. | 0.604 |
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