STRINGSTRING
all1151 all1151 all1267 all1267 icd icd all1842 all1842 coxA-2 coxA-2 coxC-2 coxC-2 coxA-3 coxA-3 coxC-3 coxC-3 alr2826 alr2826 alr2943 alr2943 alr3307 alr3307 petB petB alr3724 alr3724 all3913 all3913 all3914 all3914 ndhE ndhE gltA gltA all0253 all0253 psbV psbV ndhD ndhD all0481 all0481 asl0595 asl0595 hupL hupL all0688 all0688 hoxU hoxU ndhF-2 ndhF-2 ndhD-3 ndhD-3 all4023 all4023 all4024 all4024 alr4094 alr4094 ndhF-3 ndhF-3 ndhD-4 ndhD-4 alr4322 alr4322 alr4850 alr4850 pepC pepC ndhB ndhB ndhD-5 ndhD-5 alr5211 alr5211 hoxH hoxH all0852 all0852 ndhF ndhF ndhD-2 ndhD-2 coxA coxA coxC coxC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
all1151ORF_ID:all1151; hypothetical protein. (240 aa)
all1267Aconitate hydratase; ORF_ID:all1267; Belongs to the aconitase/IPM isomerase family. (876 aa)
icdIsocitrate dehydrogenase; ORF_ID:alr1827; icd gene product. (473 aa)
all1842NADH dehydrogenase; ORF_ID:all1842. (475 aa)
coxA-2Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (559 aa)
coxC-2Cytochrome c oxidase subunit III; ORF_ID:alr2516. (197 aa)
coxA-3Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (555 aa)
coxC-3Cytochrome c oxidase subunit III; ORF_ID:alr2734. (200 aa)
alr2826ORF_ID:alr2826; hypothetical protein. (404 aa)
alr2943ORF_ID:alr2943; hypothetical protein. (167 aa)
alr3307ORF_ID:alr3307; hypothetical protein. (393 aa)
petBPlastoquinol--plastocyanin reductase, cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
alr3724Aspartate ammonia-lyase; ORF_ID:alr3724. (471 aa)
all3913succinyl-CoA synthetase alpha chain; ORF_ID:all3913. (293 aa)
all3914succinyl-CoA synthetase beta chain; ORF_ID:all3914. (408 aa)
ndhENADH dehydrogenase subunit 4L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (101 aa)
gltACitrate synthase; ORF_ID:alr0222; gltA gene product; Belongs to the citrate synthase family. (378 aa)
all0253ORF_ID:all0253; similar to cytochrome b6. (212 aa)
psbVCytochrome c550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (163 aa)
ndhDNADH dehydrogenase subunit 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family. (538 aa)
all0481ORF_ID:all0481; unknown protein. (187 aa)
asl0595ORF_ID:asl0595; similar to cytochrome d oxidase chain I. (65 aa)
hupL[NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. (531 aa)
all0688[NiFe] uptake hydrogenase small subunit; ORF_ID:all0688; hupS gene product. (320 aa)
hoxUHydrogenase chain U; ORF_ID:alr0762; hoxU gene product. (238 aa)
ndhF-2NADH dehydrogenase subunit 5; ORF_ID:alr3956. (696 aa)
ndhD-3NADH dehydrogenase subunit 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); Belongs to the complex I subunit 4 family. (525 aa)
all4023Cytochrome D ubiquinol oxidase chain II; ORF_ID:all4023. (346 aa)
all4024Cytochrome D ubiquinol oxidase chain I; ORF_ID:all4024; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. (480 aa)
alr4094NADH dehydrogenase; ORF_ID:alr4094. (409 aa)
ndhF-3NADH dehydrogenase subunit 5; ORF_ID:alr4156. (620 aa)
ndhD-4NADH dehydrogenase subunit 4; ORF_ID:alr4157. (500 aa)
alr4322Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (284 aa)
alr4850ORF_ID:alr4850; hypothetical protein. (180 aa)
pepCPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (982 aa)
ndhBNADH dehydrogenase subunit 2; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (520 aa)
ndhD-5NADH dehydrogenase subunit 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); Belongs to the complex I subunit 4 family. (560 aa)
alr5211ORF_ID:alr5211; probable NADH dehydrogenase. (470 aa)
hoxHHydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. (483 aa)
all0852ORF_ID:all0852; hypothetical protein. (202 aa)
ndhFNADH dehydrogenase subunit 5; ORF_ID:alr0869. (618 aa)
ndhD-2NADH dehydrogenase subunit 4; ORF_ID:alr0870. (500 aa)
coxACytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (575 aa)
coxCCytochrome c oxidase subunit III; ORF_ID:alr0952. (207 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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