(30 nodes) ATP-binding cassette (ABC) transporter complex network (Nostoc sp. PCC7120)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cbiO	Cobalt transport ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (274 aa)
	cbiM-2	Cobalt transport protein; ORF_ID:alr3947; cbiM gene product. (306 aa)
	cbiO-2	Cobalt transport ATP-binding protein; ORF_ID:alr3949; cbiO gene product. (206 aa)
	alr4015	ORF_ID:alr4015; hypothetical protein; Belongs to the MlaE permease family. (263 aa)
	alr4068	ATP-binding protein of ABC transporter; ORF_ID:alr4068. (242 aa)
	alr4069	ORF_ID:alr4069; hypothetical protein. (371 aa)
	alr4485	Permease protein of ABC transporter; ORF_ID:alr4485. (268 aa)
	all4546	ABC transporter ATP-binding protein; ORF_ID:all4546. (225 aa)
	alr4781	ATP-binding protein of sugar ABC transporter; ORF_ID:alr4781; Belongs to the ABC transporter superfamily. (432 aa)
	all4824	Permease protein of sugar ABC transporter; ORF_ID:all4824. (279 aa)
	all5044	ATP-binding protein of polyamine ABC transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (381 aa)
	all5282	ABC transporter sugar permease; ORF_ID:all5282. (275 aa)
	alr5362	Sugar ABC transporter ATP binding protein; ORF_ID:alr5362. (491 aa)
	all3575	ATP-binding protein of ABC transporter; ORF_ID:all3575. (265 aa)
	cbiM	Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (261 aa)
	cbiN	Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (100 aa)
	cysA	ATP-binding protein of sulfate ABC transporter; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (338 aa)
	all0261	Sugar transport system permease protein; ORF_ID:all0261. (276 aa)
	alr0789	ABC transporter sugar permease; ORF_ID:alr0789. (294 aa)
	all0320	Sulfate transport system permease protein; ORF_ID:all0320. (291 aa)
	alr0738	Permease protein of sugar ABC transporter; ORF_ID:alr0738. (308 aa)
	all0832	ATP-binding protein of ABC transporter; ORF_ID:all0832. (257 aa)
	all0917	ABC transporter permease protein; ORF_ID:all0917. (281 aa)
	alr0974	Binding protein of ABC transporter component; ORF_ID:alr0974. (302 aa)
	alr1384	ABC transporter ATP-binding protein; ORF_ID:alr1384; Belongs to the ABC transporter superfamily. (361 aa)
	all1547	ATP-binding protein of ABC transporter; ORF_ID:all1547. (224 aa)
	all1823	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily. (366 aa)
	phnE	Phosphonate ABC tranporter permease protein; ORF_ID:all2227; phnE gene product. (274 aa)
	phnE-2	Phosphonate ABC transport permease protein; ORF_ID:all2356; phnE gene product. (264 aa)
	alr2532	Sugar ABC transport system, permease protein; ORF_ID:alr2532. (301 aa)

Your Current Organism:

Nostoc sp. PCC7120

NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
all0261	all1823	gene:10492269	gene:10493841	Sugar transport system permease protein; ORF_ID:all0261.	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	0.964
all0261	alr0738	gene:10492269	gene:10492748	Sugar transport system permease protein; ORF_ID:all0261.	Permease protein of sugar ABC transporter; ORF_ID:alr0738.	0.959
all0261	alr0789	gene:10492269	gene:10492800	Sugar transport system permease protein; ORF_ID:all0261.	ABC transporter sugar permease; ORF_ID:alr0789.	0.960
all0261	alr2532	gene:10492269	gene:10494563	Sugar transport system permease protein; ORF_ID:all0261.	Sugar ABC transport system, permease protein; ORF_ID:alr2532.	0.972
all0261	alr4781	gene:10492269	gene:10496834	Sugar transport system permease protein; ORF_ID:all0261.	ATP-binding protein of sugar ABC transporter; ORF_ID:alr4781; Belongs to the ABC transporter superfamily.	0.964
all0320	all1823	gene:10492328	gene:10493841	Sulfate transport system permease protein; ORF_ID:all0320.	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	0.463
all0320	all5044	gene:10492328	gene:10497102	Sulfate transport system permease protein; ORF_ID:all0320.	ATP-binding protein of polyamine ABC transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.	0.701
all0320	alr1384	gene:10492328	gene:10493399	Sulfate transport system permease protein; ORF_ID:all0320.	ABC transporter ATP-binding protein; ORF_ID:alr1384; Belongs to the ABC transporter superfamily.	0.761
all0320	cysA	gene:10492328	gene:10492131	Sulfate transport system permease protein; ORF_ID:all0320.	ATP-binding protein of sulfate ABC transporter; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	0.991
all0917	phnE	gene:10492930	gene:10494256	ABC transporter permease protein; ORF_ID:all0917.	Phosphonate ABC tranporter permease protein; ORF_ID:all2227; phnE gene product.	0.457
all0917	phnE-2	gene:10492930	gene:10494385	ABC transporter permease protein; ORF_ID:all0917.	Phosphonate ABC transport permease protein; ORF_ID:all2356; phnE gene product.	0.457
all1547	all4546	gene:10493560	gene:10496596	ATP-binding protein of ABC transporter; ORF_ID:all1547.	ABC transporter ATP-binding protein; ORF_ID:all4546.	0.849
all1547	cbiM	gene:10493560	gene:10495985	ATP-binding protein of ABC transporter; ORF_ID:all1547.	Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.551
all1547	cbiM-2	gene:10493560	gene:10495989	ATP-binding protein of ABC transporter; ORF_ID:all1547.	Cobalt transport protein; ORF_ID:alr3947; cbiM gene product.	0.551
all1823	all0261	gene:10493841	gene:10492269	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	Sugar transport system permease protein; ORF_ID:all0261.	0.964
all1823	all0320	gene:10493841	gene:10492328	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	Sulfate transport system permease protein; ORF_ID:all0320.	0.463
all1823	all4824	gene:10493841	gene:10496878	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	Permease protein of sugar ABC transporter; ORF_ID:all4824.	0.966
all1823	all5282	gene:10493841	gene:10497342	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	ABC transporter sugar permease; ORF_ID:all5282.	0.965
all1823	alr0738	gene:10493841	gene:10492748	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	Permease protein of sugar ABC transporter; ORF_ID:alr0738.	0.976
all1823	alr0789	gene:10493841	gene:10492800	Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.	ABC transporter sugar permease; ORF_ID:alr0789.	0.977

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