STRINGSTRING
alr2680 alr2680 alr5353 alr5353 all1644 all1644 all2646 all2646 alr2679 alr2679 all1649 all1649 all2635 all2635
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alr2680Polyketide synthase; ORF_ID:alr2680. (2518 aa)
alr5353ORF_ID:alr5353; hypothetical protein. (570 aa)
all1644ORF_ID:all1644; hypothetical protein. (585 aa)
all2646Polyketide synthase type I; ORF_ID:all2646. (1488 aa)
alr2679Polyketide synthase; ORF_ID:alr2679. (2478 aa)
all1649ORF_ID:all1649; similar to polyketide synthase. (1570 aa)
all2635Polyketide synthase type I; ORF_ID:all2635. (1565 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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