STRINGSTRING
all0412 all0412 alr5117 alr5117 all1188 all1188 alr2335 alr2335 alr2679 alr2679 all5008 all5008 alr2948 alr2948 all2810 all2810 alr2680 alr2680 all5334 all5334
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
all0412ORF_ID:all0412; putative zinc-binding oxidoreductase. (318 aa)
alr5117ORF_ID:alr5117; probable dehydrogenase. (341 aa)
all1188ORF_ID:all1188; putative oxidoreductase. (356 aa)
alr2335Sorbitol dehydrogenase; ORF_ID:alr2335. (352 aa)
alr2679Polyketide synthase; ORF_ID:alr2679. (2478 aa)
all5008Oxidoreductase; ORF_ID:all5008. (356 aa)
alr2948ORF_ID:alr2948; putative zinc-binding oxidoreductase. (335 aa)
all2810Glutathione dependent formaldehyde dehydrogenase; ORF_ID:all2810; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
alr2680Polyketide synthase; ORF_ID:alr2680. (2518 aa)
all5334Alcohol dehydrogenase; ORF_ID:all5334. (409 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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