STRINGSTRING
hupB hupB hetR hetR patS patS all1814 all1814 all0721 all0721 patB patB hupA hupA hupC hupC hypF hypF nifD nifD hetI hetI hetN hetN alr1010 alr1010 hetM hetM patN patN ftsZ ftsZ hetC hetC alr2522 alr2522
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hupBHydrogenase expression/formation protein; ORF_ID:alr0700; hupB gene product. (281 aa)
hetRHeterocyst differentiation protein; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity. Binds the promoter regions of hetR, hepA and patS. (299 aa)
patSHeterocyst-inhibiting signaling peptide; Inhibits heterocyst differentiation. Seems to control heterocyst pattern formation through intercellular signaling mechanisms. In Anabaena filaments every 10th vegetative cell terminally differentiates into a heterocyst specialized for nitrogen fixation. Seems to inhibit the formation of adjacent heterocysts. Inhibits the DNA-binding of HetR. (17 aa)
all1814ORF_ID:all1814; unknown protein. (189 aa)
all0721ORF_ID:all0721; unknown protein. (372 aa)
patBTranscriptional regulator; ORF_ID:all2512; patB gene product. (529 aa)
hupAHydrogenase expression/formation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
hupCHydrogenase expression/formation protein; ORF_ID:asr0695; hypC gene product. (82 aa)
hypFHydrogenase maturation protein; ORF_ID:alr0694; hypF gene product. (785 aa)
nifDNitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. (497 aa)
hetIPhosphopantetheinyltransferase family; Probably activates the acyl carrier protein (ACP) domain of HetM, by transferring the 4'-phosphopantetheinyl moiety of coenzyme A (CoA) to a serine residue. May be required for maintaining vegetative growth and probably acts via HetN to inhibit differentiation. (160 aa)
hetNKetoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. (287 aa)
alr1010ORF_ID:alr1010; unknown protein. (126 aa)
hetMPolyketide synthase; ORF_ID:alr5357; hetM gene product. (506 aa)
patNHeterocyst differentiation related protein; ORF_ID:alr4812; patN gene product. (215 aa)
ftsZCell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (428 aa)
hetCHeterocyst differentiation protein; ORF_ID:alr2817; hetC gene product. (1044 aa)
alr2522ORF_ID:alr2522; unknown protein. (141 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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