STRINGSTRING
hoxU hoxU hoxH hoxH asr0697 asr0697 psbAIV psbAIV psbAII psbAII alr3937 alr3937 all5185 all5185 hoxY hoxY hoxF hoxF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hoxUHydrogenase chain U; ORF_ID:alr0762; hoxU gene product. (238 aa)
hoxHHydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. (483 aa)
asr0697Tautomerase; ORF_ID:asr0697; probable 4-oxalocrotonate tautomerase. (71 aa)
psbAIVPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
psbAIIPhotosystem II protein D1; ORF_ID:alr3727. (360 aa)
alr3937Mercuric reductase; ORF_ID:alr3937. (489 aa)
all5185Mercuric reductase; ORF_ID:all5185. (509 aa)
hoxYHydrogenase small subunit; ORF_ID:alr0764; hoxY gene product. (181 aa)
hoxFHydrogenase subunit; ORF_ID:alr0752; hoxF gene product. (544 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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