Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all1811 | sigF | gene:10493829 | gene:10496298 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Group 2 sigma 70-type sigma factor F; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.541 |
| alr2405 | exbB | gene:10494435 | gene:10497105 | Flavodoxin; Low-potential electron donor to a number of redox enzymes; Belongs to the flavodoxin family. | Biopolymer transport protein; ORF_ID:all5047; exbB gene product. | 0.474 |
| alr2405 | psaD | gene:10494435 | gene:10492337 | Flavodoxin; Low-potential electron donor to a number of redox enzymes; Belongs to the flavodoxin family. | Photosystem I reaction center subunit II; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. | 0.692 |
| chlB | chlL | gene:10495480 | gene:10497136 | Protochlorophyllide reductase ChlB subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | Protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.999 |
| chlB | chlN | gene:10495480 | gene:10497134 | Protochlorophyllide reductase ChlB subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | Protochlorophillide reductase subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.999 |
| chlL | chlB | gene:10497136 | gene:10495480 | Protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | Protochlorophyllide reductase ChlB subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.999 |
| chlL | chlN | gene:10497136 | gene:10497134 | Protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | Protochlorophillide reductase subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.999 |
| chlN | chlB | gene:10497134 | gene:10495480 | Protochlorophillide reductase subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | Protochlorophyllide reductase ChlB subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.999 |
| chlN | chlL | gene:10497134 | gene:10497136 | Protochlorophillide reductase subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | Protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.999 |
| exbB | alr2405 | gene:10497105 | gene:10494435 | Biopolymer transport protein; ORF_ID:all5047; exbB gene product. | Flavodoxin; Low-potential electron donor to a number of redox enzymes; Belongs to the flavodoxin family. | 0.474 |
| hoxF | hoxH | gene:10492763 | gene:10492777 | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | 0.996 |
| hoxF | hoxU | gene:10492763 | gene:10492773 | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product. | 0.999 |
| hoxF | hoxY | gene:10492763 | gene:10492775 | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | Hydrogenase small subunit; ORF_ID:alr0764; hoxY gene product. | 0.998 |
| hoxH | hoxF | gene:10492777 | gene:10492763 | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | 0.996 |
| hoxH | hoxU | gene:10492777 | gene:10492773 | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product. | 0.977 |
| hoxH | hoxY | gene:10492777 | gene:10492775 | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | Hydrogenase small subunit; ORF_ID:alr0764; hoxY gene product. | 0.999 |
| hoxU | hoxF | gene:10492773 | gene:10492763 | Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product. | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | 0.999 |
| hoxU | hoxH | gene:10492773 | gene:10492777 | Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product. | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | 0.977 |
| hoxU | hoxY | gene:10492773 | gene:10492775 | Hydrogenase chain U; ORF_ID:alr0762; hoxU gene product. | Hydrogenase small subunit; ORF_ID:alr0764; hoxY gene product. | 0.998 |
| hoxY | hoxF | gene:10492775 | gene:10492763 | Hydrogenase small subunit; ORF_ID:alr0764; hoxY gene product. | Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product. | 0.998 |
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