Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alr3808 | nifT | gene:10495850 | gene:10493424 | Nutrient-stress induced DNA binding protein; Involved in protection of chromosomal DNA from damage under nutrient-limited and oxidative stress conditions. Binds heme (By similarity); Belongs to the Dps family. | NifT protein; ORF_ID:asr1409. | 0.454 |
| coxA-2 | coxB-2 | gene:10494546 | gene:10494545 | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| coxA-2 | coxC-2 | gene:10494546 | gene:10494547 | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome c oxidase subunit III; ORF_ID:alr2516. | 0.999 |
| coxA-2 | nifB | gene:10494546 | gene:10493530 | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Nitrogen fixation protein; Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. | 0.605 |
| coxB-2 | coxA-2 | gene:10494545 | gene:10494546 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| coxB-2 | coxC-2 | gene:10494545 | gene:10494547 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit III; ORF_ID:alr2516. | 0.999 |
| coxB-2 | nifT | gene:10494545 | gene:10493424 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NifT protein; ORF_ID:asr1409. | 0.477 |
| coxC-2 | coxA-2 | gene:10494547 | gene:10494546 | Cytochrome c oxidase subunit III; ORF_ID:alr2516. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| coxC-2 | coxB-2 | gene:10494547 | gene:10494545 | Cytochrome c oxidase subunit III; ORF_ID:alr2516. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| coxC-2 | nifT | gene:10494547 | gene:10493424 | Cytochrome c oxidase subunit III; ORF_ID:alr2516. | NifT protein; ORF_ID:asr1409. | 0.590 |
| hesA | hesB | gene:10493447 | gene:10493446 | HesA protein; May be required for efficient nitrogen fixation. | HesB protein; May be required for efficient nitrogen fixation. | 0.975 |
| hesA | nifB | gene:10493447 | gene:10493530 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogen fixation protein; Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. | 0.920 |
| hesA | nifD | gene:10493447 | gene:10493456 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | 0.764 |
| hesA | nifE | gene:10493447 | gene:10493453 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogen Fe/Mo cofactor biosynthesis E; This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor); Belongs to the NifD/NifK/NifE/NifN family. | 0.922 |
| hesA | nifH | gene:10493447 | gene:10493469 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | 0.729 |
| hesA | nifN | gene:10493447 | gene:10493452 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogenase olybdenum-iron protein; This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor); Belongs to the NifD/NifK/NifE/NifN family. | 0.919 |
| hesA | nifT | gene:10493447 | gene:10493424 | HesA protein; May be required for efficient nitrogen fixation. | NifT protein; ORF_ID:asr1409. | 0.456 |
| hesA | nifV1 | gene:10493447 | gene:10493422 | HesA protein; May be required for efficient nitrogen fixation. | Homocitrate synthase; This protein is a Fe-Mo-cofactor biosynthetic component; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.918 |
| hesA | nifW | gene:10493447 | gene:10493448 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogen fixation protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. | 0.915 |
| hesA | nifX | gene:10493447 | gene:10493451 | HesA protein; May be required for efficient nitrogen fixation. | Nitrogen fixation protein; ORF_ID:all1436; nifX gene product. | 0.936 |
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