Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alr0088 | alr3937 | gene:10492092 | gene:10495979 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | Mercuric reductase; ORF_ID:alr3937. | 0.572 |
| alr0088 | alr4745 | gene:10492092 | gene:10496798 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | Dihydrolipoamide dehydrogenase; ORF_ID:alr4745. | 0.572 |
| alr0088 | clpC | gene:10492092 | gene:10495726 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | ATP-dependent Clp protease regulatory subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.418 |
| alr0088 | glgB | gene:10492092 | gene:10492723 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.411 |
| alr0088 | recA | gene:10492092 | gene:10495310 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.798 |
| alr0088 | uvrA | gene:10492092 | gene:10495758 | Single-stranded DNA-binding protein; ORF_ID:alr0088. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.821 |
| alr3402 | alr3937 | gene:10495441 | gene:10495979 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Mercuric reductase; ORF_ID:alr3937. | 0.655 |
| alr3402 | alr4745 | gene:10495441 | gene:10496798 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Dihydrolipoamide dehydrogenase; ORF_ID:alr4745. | 0.655 |
| alr3402 | dnaJ | gene:10495441 | gene:10493502 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Chaperone protein; ORF_ID:all1488; dnaJ gene product. | 0.480 |
| alr3402 | dnaJ-2 | gene:10495441 | gene:10494477 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | DnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] | 0.480 |
| alr3402 | dnaJ-3 | gene:10495441 | gene:10495027 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | DnaJ protein; ORF_ID:alr2991. | 0.480 |
| alr3402 | dnaJ-4 | gene:10495441 | gene:10495029 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | DnaJ protein; ORF_ID:alr2993. | 0.480 |
| alr3402 | dnaJ-5 | gene:10495441 | gene:10496694 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Chaperone DnaJ protein; ORF_ID:all4643. | 0.480 |
| alr3402 | dnaK-2 | gene:10495441 | gene:10493760 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | DnaK-type molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.536 |
| alr3937 | alr0088 | gene:10495979 | gene:10492092 | Mercuric reductase; ORF_ID:alr3937. | Single-stranded DNA-binding protein; ORF_ID:alr0088. | 0.572 |
| alr3937 | alr3402 | gene:10495979 | gene:10495441 | Mercuric reductase; ORF_ID:alr3937. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.655 |
| alr3937 | alr4745 | gene:10495979 | gene:10496798 | Mercuric reductase; ORF_ID:alr3937. | Dihydrolipoamide dehydrogenase; ORF_ID:alr4745. | 0.927 |
| alr3937 | clpC | gene:10495979 | gene:10495726 | Mercuric reductase; ORF_ID:alr3937. | ATP-dependent Clp protease regulatory subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.559 |
| alr3937 | dnaK | gene:10495979 | gene:10493278 | Mercuric reductase; ORF_ID:alr3937. | DnaK-type molecular chaperone; ORF_ID:alr1264; dnaK gene product; Belongs to the heat shock protein 70 family. | 0.414 |
| alr3937 | dnaK-5 | gene:10495979 | gene:10496526 | Mercuric reductase; ORF_ID:alr3937. | DnaK-type molecular chaperone; ORF_ID:all4477; dnaK gene product; Belongs to the heat shock protein 70 family. | 0.408 |
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