Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alr1010 | hetN | gene:10493024 | gene:10497420 | ORF_ID:alr1010; unknown protein. | Ketoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. | 0.670 |
| alr1010 | ntcA | gene:10493024 | gene:10496441 | ORF_ID:alr1010; unknown protein. | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.660 |
| alr1010 | patS | gene:10493024 | gene:10494330 | ORF_ID:alr1010; unknown protein. | Heterocyst-inhibiting signaling peptide; Inhibits heterocyst differentiation. Seems to control heterocyst pattern formation through intercellular signaling mechanisms. In Anabaena filaments every 10th vegetative cell terminally differentiates into a heterocyst specialized for nitrogen fixation. Seems to inhibit the formation of adjacent heterocysts. Inhibits the DNA-binding of HetR. | 0.659 |
| fdxN | hupL | gene:10493472 | gene:10492687 | Ferrodoxin-like protein; ORF_ID:all1516; fdxN gene product. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.889 |
| fdxN | nifD | gene:10493472 | gene:10493456 | Ferrodoxin-like protein; ORF_ID:all1516; fdxN gene product. | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | 0.860 |
| hetN | alr1010 | gene:10497420 | gene:10493024 | Ketoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. | ORF_ID:alr1010; unknown protein. | 0.670 |
| hetN | ntcA | gene:10497420 | gene:10496441 | Ketoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.730 |
| hetN | patS | gene:10497420 | gene:10494330 | Ketoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. | Heterocyst-inhibiting signaling peptide; Inhibits heterocyst differentiation. Seems to control heterocyst pattern formation through intercellular signaling mechanisms. In Anabaena filaments every 10th vegetative cell terminally differentiates into a heterocyst specialized for nitrogen fixation. Seems to inhibit the formation of adjacent heterocysts. Inhibits the DNA-binding of HetR. | 0.916 |
| hupL | fdxN | gene:10492687 | gene:10493472 | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | Ferrodoxin-like protein; ORF_ID:all1516; fdxN gene product. | 0.889 |
| hupL | nifD | gene:10492687 | gene:10493456 | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | 0.896 |
| hupL | ntcA | gene:10492687 | gene:10496441 | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.664 |
| nifD | fdxN | gene:10493456 | gene:10493472 | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | Ferrodoxin-like protein; ORF_ID:all1516; fdxN gene product. | 0.860 |
| nifD | hupL | gene:10493456 | gene:10492687 | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.896 |
| nifD | ntcA | gene:10493456 | gene:10496441 | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | 0.656 |
| ntcA | alr1010 | gene:10496441 | gene:10493024 | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | ORF_ID:alr1010; unknown protein. | 0.660 |
| ntcA | hetN | gene:10496441 | gene:10497420 | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | Ketoacyl reductase; May be involved in repressing heterocyst differentiation and may be essential for preventing all vegetative cells from differentiating. | 0.730 |
| ntcA | hupL | gene:10496441 | gene:10492687 | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.664 |
| ntcA | nifD | gene:10496441 | gene:10493456 | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | Nitrogenase molybdenum-iron protein alpha chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. | 0.656 |
| ntcA | patS | gene:10496441 | gene:10494330 | Nitrogen-responsive regulatory protein; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. | Heterocyst-inhibiting signaling peptide; Inhibits heterocyst differentiation. Seems to control heterocyst pattern formation through intercellular signaling mechanisms. In Anabaena filaments every 10th vegetative cell terminally differentiates into a heterocyst specialized for nitrogen fixation. Seems to inhibit the formation of adjacent heterocysts. Inhibits the DNA-binding of HetR. | 0.883 |
| patS | alr1010 | gene:10494330 | gene:10493024 | Heterocyst-inhibiting signaling peptide; Inhibits heterocyst differentiation. Seems to control heterocyst pattern formation through intercellular signaling mechanisms. In Anabaena filaments every 10th vegetative cell terminally differentiates into a heterocyst specialized for nitrogen fixation. Seems to inhibit the formation of adjacent heterocysts. Inhibits the DNA-binding of HetR. | ORF_ID:alr1010; unknown protein. | 0.659 |
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